Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02397 ATGTCTTCCTCCGCTAGGTTTTCTCGTTCCCCAAATCTTCATTGCATGGAGGAAGAAAATGAGAACCAAGGAGGTATTGTTGATGATTATTATGCATATAATGAGATTATCGCGCTTTTTGACCACATATGGGAGGGAAAGTTGGAGGAAAGTGGTGATTTTTGTGTGAAGTGCACTGAATGTGATGAAAAATTGGACATAAGAAGGTATTGGGAGTTTTTGCAAACATATGATGTTGGAGATAAGAAGGTTTTTCTACCGGTGGCGGCGACGGTGAATTGCGCCGACAACACCGGCGCCAAGAACCTCTACATCATATCAGAGGGGATCGAGGGAAGGTTGAACCGACATGGTTATGGCCACTGTCAAGAAGATAAAACCTACGCAACAAACAACTTCATATTCATATTTCTGATCTGTGAATTCACCGAAACTCTCGTCACTGTCACCACGGAACACAGAACGCTGGAACTCAGCCTCGGATCGGCCAAGGATCTGAAAAAAGTGAATTTCTTTTCCAGGATAGACGTGTATGTCGTCGTTTCGCTCTCCGGCGTCCAAAAGATCAAGACAGTTAGGCGATTGGAGGAACTTGATCTGGGTCATCTTGGTGTCCCACTAATTTGGGATGCTAGGGTTTCGCTAGTTTGTGGGAACCAGAACGGATCGTGTGAGGTTGGGAACGGACTTGGGTTTGTTGTTGAGAGAATTGGTTTCCATGGGTTTGATAGTGAAATTGATGGGTTGAAAACATTCTCGGAGCATTCGCTAATGTTTCAAGGTATGAGGGAGTTGTTGGGAGAGGAAGGTTTCTTCTCGATAGGTTTTCTTGGAAGCTTTAGTGGGGTGGAGGTGGTAGTGAGGAATACACTTCCAGAAGATGTTATCCGGTATAGATGTGGGAGATTCAAAAGCACGAATTTCTGGAAAGGTCATTCGGGAAGTATGTTTGTGCTACCTATTTCTCTCTACATCTCCTATTTCGAACTTGCAACTCCAATATTTGTACATCTGCAACTCCTTGAACACCTAGTCGGTGGAGGAGTCGAAGCCGGAGAAATCGCCAAAGTCGTTGTCATCGTCTTTATCGTCGTTGAAGTGGTCGGGATATGGGAAGTGGACACGGTGCGAATTAAGACAGAAGCTGGGAAAAGTAGTGGCGTCGCTGTTTGCCAGATCAACAAAAAGTTAACGCCTGGAGGCTATTTCCCTGGAGGCTTCAATCCTCCTGAGCTCAATCAGCCCCATTCCAGTCAAGGCAGTAGTGCGGAGATTAGCTTCGCTGCCGCTCTCTCCCTCGGCACGGATAATCGCGGCCCGCCGCTCCTGCTCGGCCTTCATCACTACGAACTTAGATCTCTCAGCCTCCTGTTGCGCCACCTGCTTCTGTTCCACCGTCTGCGAGAACTCGCTGTCGTAGGAGAGGTGCGTGATGGCGACATCATCGAGAACAATGTTGAAATCCTTGGCGCGGCGAATGAGACTGTCGTGAACCAGAGCGGATACCTGAGAACGGTCGGTGAGAAGCTGATCCGTATTGAACTGCGCGACGACGGCCTTGAGAACCTCGTTGCCTATGGACGGAAGAACCTTCTCATCGTACTCAAGGCCGAGGTTCTTTACAATAACAGGGAGCTTGCCGAAGGACAGGATAGGACGCAGAGTGTCTTTGGTGCCGGAGATGGAGGAGAAGGTGTGAGGGCGCGTGCGGATGTCGAAGATGTAAGGCTTCTGGACCCACGGGATGAGGAAATGGGTTCCCTCGCCTACGGTGTCGTCGAGAATGCCTCGGAAACGGGAGGAGGAGAGGGCGGTGGCCGCCACGCCCAGCCCGAAGGCGTAGCGGGCAAGATTCGTCAGGAAAGAGACGGCAGCTTGGCTGCTTCCCATTTCGGAGAGGGAGACTCTGCTAATGCTAACCTTTTGAATGTTATTGGTGTTGTTGCTGCTACTATCATTGTTGAAGTATTTGTGAGCATCGAATATGCTAAGCTCGGAGATGGCGTCTTCAACAGGTCCTGTAGTTATTGTTGCCTTGTTATCGGGTCTGAGATAGGATGA 2061 0.4915 MSSSARFSRSPNLHCMEEENENQGGIVDDYYAYNEIIALFDHIWEGKLEESGDFCVKCTECDEKLDIRRYWEFLQTYDVGDKKVFLPVAATVNCADNTGAKNLYIISEGIEGRLNRHGYGHCQEDKTYATNNFIFIFLICEFTETLVTVTTEHRTLELSLGSAKDLKKVNFFSRIDVYVVVSLSGVQKIKTVRRLEELDLGHLGVPLIWDARVSLVCGNQNGSCEVGNGLGFVVERIGFHGFDSEIDGLKTFSEHSLMFQGMRELLGEEGFFSIGFLGSFSGVEVVVRNTLPEDVIRYRCGRFKSTNFWKGHSGSMFVLPISLYISYFELATPIFVHLQLLEHLVGGGVEAGEIAKVVVIVFIVVEVVGIWEVDTVRIKTEAGKSSGVAVCQINKKLTPGGYFPGGFNPPELNQPHSSQGSSAEISFAAALSLGTDNRGPPLLLGLHHYELRSLSLLLRHLLLFHRLRELAVVGEVRDGDIIENNVEILGAANETVVNQSGYLRTVGEKLIRIELRDDGLENLVAYGRKNLLIVLKAEVLYNNRELAEGQDRTQSVFGAGDGGEGVRARADVEDVRLLDPRDEEMGSLAYGVVENASETGGGEGGGRHAQPEGVAGKIRQERDGSLAASHFGEGDSANANLLNVIGVVAATIIVEVFVSIEYAKLGDGVFNRSCSYCCLVIGSEIG 686
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02397 Vimu-Chr2 19579574 19584103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02397 86 116 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 90.625 1.31e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02397 K02894 - pvu:PHAVU_002G279600g 80.4925