LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu2g02344	ATGGCTTCATTTCCTTCAAATTCTGCATCAGAACATAGCATGGCCAGTGCACAAAACAGCTCCTCACCTTCTTTCATGACTAGAGTGGCTATGAGAGTCTCTAGATCAAGATGGTTCACCTTCTTGAGAAGAGTATTCCATTACCAAAATGGACCAAGATCTGATCTTGGCTCCAACCCTTTCAATTCTAGCACTTGGATGATGCTGGAGTTGATTGCTTTACTGGTCCAGATAACAAGCACAACACTCACGTTGGCCATTTCAAAGAGTGAGAAGCCTATTTGGCCTATGAGGGTGTGGATAGCAGGTTATGATATTGGGTGTCTTCTTAATCTGCTGCTACTTTGTGGCCGCTACTATCAACTCCATGTGACTCAAGGAGGTGCTTTTAGCCTTTCTGATTTGGAGCAGCAGAGAAACAATGAAGAATCAAGTGGCCCTACGGATTTGCACATGGGGAAACAGAGCTGGAAAGGGGTCAGAGCATTGATGAAGATTGAAATTCTTTGTTCTGAGGGGATCACATTTGATGGACAAATGCAGAAGTTCTCTAGAGCTTTTCTTTGCCATATGGTGCTATGCATGATCCTACTAGCTTGGAATGCAATATGCTACTCTTTCCCTTTTCTTCTGTTTTTGCTTTTGTGCTGCTGTGTGCCACTGATGAGCACCCTCCTTGGATACAACATGAGCATGGGCTCCTCTGCAAGAGGGGCATCAGATGATCAAATCTCACAAATCCCAAGTTGGAGATACAAAGGTGCTCACACCAACTTGGACTTTGCCAATGACTCTCAAACCACTCAAAGATTGATCAATGAGGATCCAGTAAGTGACACTATTATCACACAGAATCTCCAATAA	864	0.4363	MASFPSNSASEHSMASAQNSSSPSFMTRVAMRVSRSRWFTFLRRVFHYQNGPRSDLGSNPFNSSTWMMLELIALLVQITSTTLTLAISKSEKPIWPMRVWIAGYDIGCLLNLLLLCGRYYQLHVTQGGAFSLSDLEQQRNNEESSGPTDLHMGKQSWKGVRALMKIEILCSEGITFDGQMQKFSRAFLCHMVLCMILLAWNAICYSFPFLLFLLLCCCVPLMSTLLGYNMSMGSSARGASDDQISQIPSWRYKGAHTNLDFANDSQTTQRLINEDPVSDTIITQNLQ	287

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu2g02344	287	MobiDBLite	consensus disorder prediction	1	21	-	-
	Vimu2g02344	287	PANTHER	C3H4 TYPE ZINC FINGER PROTEIN	176	277	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu2g02344	Vimu-Chr2	18904584	18906477	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu2g02344	5	285	C3H Transcription Factor Family	AT5G55970	55.160	2.32e-95	282

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu2g02344	-		-	gmx:100818715	396.356