Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02330 ATGCTTGCCCTTCCACCACCACCTCCTCCACCACCCCTAGCCACAAGAAAACAAACCAAGCAAGTGTCTCCTGATCAAATTGTCATATCAAAACACCCCATCAAACAACATTCTCAGGAACCAGAAGCACCAAATTATGTTGCAAGAAAGTCAATTAGGCCACCACCACCACCACTAAGGCAGCCTCCATTTCAAAGGACCAACCCCATCATATGGTTTGCTGCAGTGTTGTGTCTCATATTCAGCCTTGTGCTTATCTTCTTTGGAGTTGCAACTTTGATCATCTTCCTAGGCATCAAACCAAGGAACCCCACTTTTGACATCCCCAATGCAAACCTTAATTCAGTGTATTTTGACTCACCAGAATACTTCAATGGTGACTTCACCCTCCTTGCAAACATCACCAACCCCAACAGGAAGATTGATGTGAGGTTTGAGTCCTTGGATGTTGAACTTTTCTTCTCAGACAGCATCATATCAACACAGTCTATTCAGCCCTTTACTCAGAGGAGAAGGGAGAGCAGGTTGGAATCACTGCACTTCATATCCAGCTTGGTGTTTTTGCCTAAGGATCTTGGTGTAAACCTTAAAGGACAGGTGCAAAGTAACATGGTCAAGTACAATGTGAGAGGAACCTTTAAAGTGAGAGTAACTATGGGGTTATTCCACTTGTCTTACTGGTTGCATAGCAGATGCCAGATAGAGATGACTGCTCCACCAACTGGTGTCTTGGTGGCTAGGAAGTGCATCACCAAGAGATGA 762 0.4462 MLALPPPPPPPPLATRKQTKQVSPDQIVISKHPIKQHSQEPEAPNYVARKSIRPPPPPLRQPPFQRTNPIIWFAAVLCLIFSLVLIFFGVATLIIFLGIKPRNPTFDIPNANLNSVYFDSPEYFNGDFTLLANITNPNRKIDVRFESLDVELFFSDSIISTQSIQPFTQRRRESRLESLHFISSLVFLPKDLGVNLKGQVQSNMVKYNVRGTFKVRVTMGLFHLSYWLHSRCQIEMTAPPTGVLVARKCITKR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02330 253 MobiDBLite consensus disorder prediction 1 15 - -
Vimu2g02330 253 MobiDBLite consensus disorder prediction 1 60 - -
Vimu2g02330 253 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 244 - -
Vimu2g02330 253 Pfam Late embryogenesis abundant protein 133 231 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02330 Vimu-Chr2 18699984 18701288 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02330 - - gmx:100803431 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02330 2 18699984 18701288 Vimu1g00266 1 1550784 1551479 PCT