Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02307 TTGCGTCCACCGCCGTGTCGTCACACTTCCCCTTCTCGCGCTGACGAGACTGATAATTGGGCGGCAGCAAAGAAACCTTCGGAGGGTTTGAAAGGAGGGAGAGGGATAGAGGAGGGTTCTTCGATTCGCAGTCACGCGCTGACGAATCGGAGAGTTGGGTTTCGAATAAGAGCTTTGTGTCGTCAAAGCAGATATTCGCCTCCAAAGGTCGAGGGTTCGAGAGAGAGAAAGGTTATTGGGTTTGGCTCCAGCGGCGGCGCTGATTCAAATGACTGGAACAAGAAGATGGGTGAATCCAATGTTGGTAGCGACAGTGTTGGTGCTGGTGGAGGGAGACCAAGGCTTGTTCTGCAACCTCGGTCTCTGTCGGCGTCCAATGAAGGTGGGGATGGGAATGTGGGGAAACCTAAAGGGGTTAATCCTTTCGGAGAAGCGAGGCCAAGGGAGCAAACCTGA 456 0.5373 MRPPPCRHTSPSRADETDNWAAAKKPSEGLKGGRGIEEGSSIRSHALTNRRVGFRIRALCRQSRYSPPKVEGSRERKVIGFGSSGGADSNDWNKKMGESNVGSDSVGAGGGRPRLVLQPRSLSASNEGGDGNVGKPKGVNPFGEARPREQT 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02307 151 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 10 150 IPR010433 GO:0003743
Vimu2g02307 151 MobiDBLite consensus disorder prediction 1 42 - -
Vimu2g02307 151 MobiDBLite consensus disorder prediction 63 151 - -
Vimu2g02307 151 Pfam Plant specific eukaryotic initiation factor 4B 9 150 IPR010433 GO:0003743
Vimu2g02307 151 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02307 Vimu-Chr2 18422945 18423482 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02307 5 151 Eukaryotic Initiation Factors Gene Family AT4G38710 32.620 1.62e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02307 - - pvu:PHAVU_011G033300g 165.622