Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02244 ATGCAAAGGATACAAGACTGGGACCCCAAGTTTTTCATACTTGCACATATACTAGAGAAATACCGTGTTTATGTTTCCAAGTTCAGAATGCAAGTGGTGATTGCTCGCATGTCTGAGTCACTTGAATTAGCAGGAGATTACCATAGGAAATTGAGAGAAGCCTATGAAACTGAAGAGAAATTGAAAGAAGCAGATGTTTTGAGAAGGGGCAAAAATCATTTGGTTAGATTGCTTGATAAGGTGGAGAGGCAACTGTGTGAAACACCTTTTTTGGCAGGTCAAGATTTTACCATGTCTGATGTGATGCTCATTCCAGTATTAGCTCGTTTAAAACTCTTGGATTTAGAGAATGAGTACATAACTGGAAGGCCAAACATTGTTGAGTACTGA 390 0.3897 MQRIQDWDPKFFILAHILEKYRVYVSKFRMQVVIARMSESLELAGDYHRKLREAYETEEKLKEADVLRRGKNHLVRLLDKVERQLCETPFLAGQDFTMSDVMLIPVLARLKLLDLENEYITGRPNIVEY 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02244 129 Gene3D - 33 129 - -
Vimu2g02244 129 Pfam Glutathione S-transferase, C-terminal domain 66 129 - -
Vimu2g02244 129 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 129 IPR044617 GO:0004364
Vimu2g02244 129 SUPERFAMILY GST C-terminal domain-like 61 129 IPR036282 -
Vimu2g02244 129 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 129 IPR010987 -
Vimu2g02244 129 CDD GST_C_family 52 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02244 Vimu-Chr2 17605325 17605714 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02244 1 129 Glutathione S-transferase Gene Family AT1G77290 62.791 2.38e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02244 K22077 - gmx:100808461 214.927