Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02238 ATGGACTCGCACTGGAGCTCTCGCCAGACGTTTGAACGTTACGTTTATGATTATCTTGTCAAACGAAACATGCACCACACTGCTGAGGTTTTCAGGAACGAGACTAACCTTCATCTGGATGCCGCTGCTTTTTCAACTGATGCTGTGGATGTCCCAGAAGGATTTTTGCTGGAGTGGTGGTCTGTCAACAATGATTTTGACTTCTTCAGACAAATGCATGACAAACGTGGGTTGTTCGGAGGAATGCAAGGACGTAATGCTTTTCAAGAAGCAGGGTCTTCGATAAATGTTCAACCAATGTATCAATTGCCTAATAGTTTTAATCCTGGGTCAATGCAAGCTCATCGTTCTCCCTCCTCCCTCCCTTTACCTGCTAGTCTCTTCTTCATATATATTTTTCTTTTTGTTGCAGTTGAAGCACTCAACATAGGAAGCAACTTGATGCCATCACGTGTAACTGGTGAATGGCCAGTATTTTCCTCACCTTCTGCACACCAAAAAGTAACTGGTGAATGGCCAGTATTTTCCTCACCTTCTGCACACCAAAAAGTAACTGGTGAATGGCCAGTATTTTCCTCACCTTCTGCACACCAAAAAGTAAGTGGTAAACTGCCACAATTTCTGTTCCCATTTCCCCGTCGAGAGGCATTTGGTCAATTGCAACAACTTTCATCTTTACATCAAGACGTTGTGATGACACCAGTAGAGAAAACAACACAGGTTTCCAATGTCAATAGTGCAGGCGCAAATTCTGGATTTATTGAGGAAACAGATCCGCTCATTGAGAATTTATTAAAATCTTTTTGGTTGTTTGAACCTGATGAACCAAGCCTGTTTGACAAGTCAACAGTAGGACAGAGCAGCAGAAATGCCGAGAATTTGGTGGAACGTGGAGTTGGAAACACTAGTATGAATACAATTGCTGGTTCAGCACAAGCACTGGAGGATGATAACAAAAGTGACACAAGTGATTGTTCCAGCAGTTTCGAATTTGTTCTTTCTGATGCAGATGCCTCATCAGGTAACTATATTTTTATGGGAGGATTAACTAACTTGAGTGCATTAGTTGGTATTATCTTATTGCACTCTGTATAA 1095 0.4174 MDSHWSSRQTFERYVYDYLVKRNMHHTAEVFRNETNLHLDAAAFSTDAVDVPEGFLLEWWSVNNDFDFFRQMHDKRGLFGGMQGRNAFQEAGSSINVQPMYQLPNSFNPGSMQAHRSPSSLPLPASLFFIYIFLFVAVEALNIGSNLMPSRVTGEWPVFSSPSAHQKVTGEWPVFSSPSAHQKVTGEWPVFSSPSAHQKVSGKLPQFLFPFPRREAFGQLQQLSSLHQDVVMTPVEKTTQVSNVNSAGANSGFIEETDPLIENLLKSFWLFEPDEPSLFDKSTVGQSSRNAENLVERGVGNTSMNTIAGSAQALEDDNKSDTSDCSSSFEFVLSDADASSGNYIFMGGLTNLSALVGIILLHSV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02238 364 ProSiteProfiles LIS1 homology (LisH) motif profile. 7 39 IPR006594 GO:0005515
Vimu2g02238 364 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 1 140 IPR044716 GO:0003714
Vimu2g02238 364 Pfam LisH 13 35 IPR006594 GO:0005515
Vimu2g02238 364 SMART Lish 7 39 IPR006594 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Vimu2g02238 LisH 6.1e-08 CL0561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02238 - - vra:106776158 585.104