Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02229 ATGACAGGGAAGGGTGACGCGGGAAAAGGTTCACAGTTTCTTCTTCAACCTTCAAATTCCCCTTCACTGTTCTCTCATTCTCGCAACAAAAATGCCCGTCATCGCCGCAAAACGCTCGTTGCGATCTCATCCTTCCTCGCCTCCCCGGAAATCGCCTCGCCGATGCACCGCAGCAACCGCCAATTCCTCCCGCAATGTAATTCTCAAAACCCTAACTACCCTACATACGCTCTCTCATCTCTTTCAATTTCTGTGATCAACCGATTGCTTGTTGTTCTTTTGCAGGTAAACAATTTCGGCACAGATGAAAACCAAGCTGATCCGGCAGCTGTGAAACCCAGGTGGAATCCCAAAGATGGTGAGCAAATAAAGGCGGTGAAGCTAGCATTGCACTTGTCCACTGCGCCGTCTTCGGTTGTGTGCCGTGAGGAGGAGCAGAATGTTGTTTTGGAGTTCTGCAAAGGGTGCGTTGAGCATAGAAAGGCCGGGAGTCTGTACATTTGCGGGTGTCCCGGAACCGGGAAATCGTTGTCTATGGAGAAAGTGAAAGAGCAATTACTCAATTGGTCTAAGGAGGCAGGTCTCCCGCTGCCAGATGTTTTATCCGTGAACTGCACAACTCTTGCTAGCACATCGGATATTTTCACAAAGCAGATGATTGGGTTGAACCAAACACAGGGTAAAAAGGTTTCAGCCTCGCCCTTACAGCAACTTCATAACATGTATTCTCAGAAATCATCTGTCAAGAACATGACATTGATAGTAGCTGACGAATTAGATTATTTGATAACCAAAGACAGAGCCGTTCTTCATGATCTTTTCATGCTCACTACCTTTCCTTTTTCTAGATGTATATTGATAGGCAAGCCTGTGGTTGTAAATTTCCAGGCTTACTCGAATGATCAGATCCTCAAGATTCTTGAAGAAAGGTTAAAGGCACTTCCTTACATTGTCTTTCAACAGCAGGCCCTGGAACTATGTGCTAGGAAAGTTGCCGCATCTTCTGGAGACATGCGGAATGCCCTTTCTATATGCTGGAGTGCAATCGAGATGCTTGAAGCAGAAATTAGAGAATCTGCGTGCAATTTGAACACTTCATTGGAAGAGATATCATTCTCCCAACAAAATCTTCCCACAGCTCCTGATTGTATGAAAAAACGTGAATTTGATATTGTGAGAACTGATCATATGGCTCGTGCTTTGTCCAAGACTTATAGATCACCGGTGGTGGATACGATACAATCTCTGCCACATCATCAGCAGATTATACTCTGCTCTTCTATGAATCACTTTCGAGAAGCTAAGAAAGATACATTCCTCGGAGAGTTGTATAAATCGTATGTGGGGATATGCAGATCATCTTTAATTCCTCCAGCAGGAATCTTAGAATTTTCGAACATGTGCAGAGTGCTAAGTGACCAGGGTCTTATTAAACTAGGACAATCTCGAGAGGACAAATTAAGAAGAGTGTCGCCTAAAGTAAATGAGGGTGATATTACTTTCGCATTGCAGACTGTTAGTGTTCATTCAACATGGCGTGAGATCAAAGATTCTTCATTGGATAAAGACAAGTTCTTTTGGTTCAAACCGGTGTCTGCATTATATTATATGAAGTGGTATACTCGATTAAAGCATGGAGTTGAAATCACTTCGGCAGATTTTTTGCTCAGCAAAAGCTGTTAG 1683 0.4355 MTGKGDAGKGSQFLLQPSNSPSLFSHSRNKNARHRRKTLVAISSFLASPEIASPMHRSNRQFLPQCNSQNPNYPTYALSSLSISVINRLLVVLLQVNNFGTDENQADPAAVKPRWNPKDGEQIKAVKLALHLSTAPSSVVCREEEQNVVLEFCKGCVEHRKAGSLYICGCPGTGKSLSMEKVKEQLLNWSKEAGLPLPDVLSVNCTTLASTSDIFTKQMIGLNQTQGKKVSASPLQQLHNMYSQKSSVKNMTLIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGKPVVVNFQAYSNDQILKILEERLKALPYIVFQQQALELCARKVAASSGDMRNALSICWSAIEMLEAEIRESACNLNTSLEEISFSQQNLPTAPDCMKKREFDIVRTDHMARALSKTYRSPVVDTIQSLPHHQQIILCSSMNHFREAKKDTFLGELYKSYVGICRSSLIPPAGILEFSNMCRVLSDQGLIKLGQSREDKLRRVSPKVNEGDITFALQTVSVHSTWREIKDSSLDKDKFFWFKPVSALYYMKWYTRLKHGVEITSADFLLSKSC 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02229 560 CDD Cdc6_C 417 499 IPR015163 -
Vimu2g02229 560 Gene3D - 120 288 IPR027417 -
Vimu2g02229 560 MobiDBLite consensus disorder prediction 1 32 - -
Vimu2g02229 560 SMART Cdc6_C_2 424 503 IPR015163 -
Vimu2g02229 560 SUPERFAMILY "Winged helix" DNA-binding domain 409 507 IPR036390 -
Vimu2g02229 560 Gene3D - 414 498 IPR036388 -
Vimu2g02229 560 MobiDBLite consensus disorder prediction 12 27 - -
Vimu2g02229 560 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 109 506 - -
Vimu2g02229 560 Pfam AAA domain 161 278 IPR003593 GO:0016887
Vimu2g02229 560 Coils Coil 349 369 - -
Vimu2g02229 560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 358 IPR027417 -
Vimu2g02229 560 FunFam Cell division control protein 416 506 - -
Vimu2g02229 560 Pfam CDC6, C terminal winged helix domain 424 502 IPR015163 -
Vimu2g02229 560 Gene3D - 289 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02229 Vimu-Chr2 17410384 17415065 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02229 111 506 Core DNA Replication Machinery Family AT2G29680 57.381 4.92e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02229 K02213 - gmx:100791200 710.679