Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02212 ATGGTGTTGGGTGTTGTTCCACCGCGTGCGGTTGGGAAAGGAAGGGCAAAGGACTTAGTGGTCCCCTTCAGATGTGACCAACTTCTCCCATGCCTTTGCCTTTGTCTATTTGTTTTTGGAATATCAGTCTACGCGTCTTCACCTACTCGCCTTCGCCTTCTGCCCAGGCATAAAGAAGACTTTAAGCTGGCAGAAGACGAAAAAAATGTAGTTGAACATATGTTTGATCAACAGTTGACCGATTCTGCCCTTAAACTATCATGTCGGGCGACACTGGCCAATTGGAATTTGGTGTACGCCTTTGATTGGGAGAAACAAGCTGAGTCAGCCCAATTGATAGTAGAAGTTGAACACATATTGGTGAATGCTCAAGAAGGTGATCAGTATCTTAAAAGGCAAAAGGAGGAATTGGAAGAAACATGCCTTAAAAGTCGTAACCAGGAGGTGGAAGAAATCATTGTTAAGCTTAAAGAACAACTGAATAAGGTGATGGCTTTCAACCGAAACCTGGGTGAAGTTGGATGTAATGTCAGACATGAGAGGGATACCTTGGCTGCTAAGTTGCAAGCCCAAAATCTTCAGATTGATGAAATGCATAAAGCCATATACGAAGAGCATTCCCGAGGGTTCAAGAAAGCTATGAGGCAAATTCCTTATCTCCTCAACGTGTTCATTGAGGGGTTTGACTTCGATGTGATGAAAGATATATACCAAGGGGAGTTCGTGCCTTTGAAAGATATTCCTGATGAGGAATTTGAAGCAAAAATACCAACAGAGGAAGTGGCTGAAGAGGCAGTGGCTGAGAAAGAAGTGACCGAGGAAGAAGTGGTTGAGGAAGAAATGGTTGGGGAGGAATTTGCTGAAGAGGATGGAGGATTTTGTGAGGAAAGTGGTGTTCCTCATATATCTAGCTATCTTCCAAGGGCGTGTCCTCCTCCTTTTGCTTTCTTAGGTCCAAAATGCGCACTTTGGGACTGTCCAAGACCTATTCAAGGGTTGGACTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTTGCTTTAAATGAAGGACCACCAGGCATGACCCCAGTTCTAAGACCTGGGGGAATTGGACTCAAGGATAATTTACTTTTCGCAGCTCTTAGTGCAAAGGCACACGAAAAAGTTGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAATCTCCATGGAACGCACCTGATTTGGGGAAGTGCTGGAAGCATCGGTGGAGGGAGCAACGTCTCAACCCAAAGGACATTAAGTTAACATTAGCCCAATATTACTAA 1296 0.446 MVLGVVPPRAVGKGRAKDLVVPFRCDQLLPCLCLCLFVFGISVYASSPTRLRLLPRHKEDFKLAEDEKNVVEHMFDQQLTDSALKLSCRATLANWNLVYAFDWEKQAESAQLIVEVEHILVNAQEGDQYLKRQKEELEETCLKSRNQEVEEIIVKLKEQLNKVMAFNRNLGEVGCNVRHERDTLAAKLQAQNLQIDEMHKAIYEEHSRGFKKAMRQIPYLLNVFIEGFDFDVMKDIYQGEFVPLKDIPDEEFEAKIPTEEVAEEAVAEKEVTEEEVVEEEMVGEEFAEEDGGFCEESGVPHISSYLPRACPPPFAFLGPKCALWDCPRPIQGLDWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDNLLFAALSAKAHEKVVGIPECEGAATAKSPWNAPDLGKCWKHRWREQRLNPKDIKLTLAQYY 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02212 431 PANTHER TRANSCRIPTION FACTOR VOZ1 125 405 IPR039277 GO:0006355|GO:0048578
Vimu2g02212 431 Coils Coil 130 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02212 Vimu-Chr2 17137543 17150100 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02212 290 405 VOZ-9 Transcription Factor Family AT1G28520 77.049 9.43e-59 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Vimu2g02212 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02212 - - gmx:100784593 232.646