LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu2g02212	ATGGTGTTGGGTGTTGTTCCACCGCGTGCGGTTGGGAAAGGAAGGGCAAAGGACTTAGTGGTCCCCTTCAGATGTGACCAACTTCTCCCATGCCTTTGCCTTTGTCTATTTGTTTTTGGAATATCAGTCTACGCGTCTTCACCTACTCGCCTTCGCCTTCTGCCCAGGCATAAAGAAGACTTTAAGCTGGCAGAAGACGAAAAAAATGTAGTTGAACATATGTTTGATCAACAGTTGACCGATTCTGCCCTTAAACTATCATGTCGGGCGACACTGGCCAATTGGAATTTGGTGTACGCCTTTGATTGGGAGAAACAAGCTGAGTCAGCCCAATTGATAGTAGAAGTTGAACACATATTGGTGAATGCTCAAGAAGGTGATCAGTATCTTAAAAGGCAAAAGGAGGAATTGGAAGAAACATGCCTTAAAAGTCGTAACCAGGAGGTGGAAGAAATCATTGTTAAGCTTAAAGAACAACTGAATAAGGTGATGGCTTTCAACCGAAACCTGGGTGAAGTTGGATGTAATGTCAGACATGAGAGGGATACCTTGGCTGCTAAGTTGCAAGCCCAAAATCTTCAGATTGATGAAATGCATAAAGCCATATACGAAGAGCATTCCCGAGGGTTCAAGAAAGCTATGAGGCAAATTCCTTATCTCCTCAACGTGTTCATTGAGGGGTTTGACTTCGATGTGATGAAAGATATATACCAAGGGGAGTTCGTGCCTTTGAAAGATATTCCTGATGAGGAATTTGAAGCAAAAATACCAACAGAGGAAGTGGCTGAAGAGGCAGTGGCTGAGAAAGAAGTGACCGAGGAAGAAGTGGTTGAGGAAGAAATGGTTGGGGAGGAATTTGCTGAAGAGGATGGAGGATTTTGTGAGGAAAGTGGTGTTCCTCATATATCTAGCTATCTTCCAAGGGCGTGTCCTCCTCCTTTTGCTTTCTTAGGTCCAAAATGCGCACTTTGGGACTGTCCAAGACCTATTCAAGGGTTGGACTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTTGCTTTAAATGAAGGACCACCAGGCATGACCCCAGTTCTAAGACCTGGGGGAATTGGACTCAAGGATAATTTACTTTTCGCAGCTCTTAGTGCAAAGGCACACGAAAAAGTTGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAATCTCCATGGAACGCACCTGATTTGGGGAAGTGCTGGAAGCATCGGTGGAGGGAGCAACGTCTCAACCCAAAGGACATTAAGTTAACATTAGCCCAATATTACTAA	1296	0.446	MVLGVVPPRAVGKGRAKDLVVPFRCDQLLPCLCLCLFVFGISVYASSPTRLRLLPRHKEDFKLAEDEKNVVEHMFDQQLTDSALKLSCRATLANWNLVYAFDWEKQAESAQLIVEVEHILVNAQEGDQYLKRQKEELEETCLKSRNQEVEEIIVKLKEQLNKVMAFNRNLGEVGCNVRHERDTLAAKLQAQNLQIDEMHKAIYEEHSRGFKKAMRQIPYLLNVFIEGFDFDVMKDIYQGEFVPLKDIPDEEFEAKIPTEEVAEEAVAEKEVTEEEVVEEEMVGEEFAEEDGGFCEESGVPHISSYLPRACPPPFAFLGPKCALWDCPRPIQGLDWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDNLLFAALSAKAHEKVVGIPECEGAATAKSPWNAPDLGKCWKHRWREQRLNPKDIKLTLAQYY	431

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu2g02212	431	PANTHER	TRANSCRIPTION FACTOR VOZ1	125	405	IPR039277	GO:0006355\|GO:0048578
	Vimu2g02212	431	Coils	Coil	130	150	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu2g02212	Vimu-Chr2	17137543	17150100	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu2g02212	290	405	VOZ-9 Transcription Factor Family	AT1G28520	77.049	9.43e-59	198

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	VOZ	Vimu2g02212		None	None	None

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu2g02212	-		-	gmx:100784593	232.646

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