Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02163 ATGGTTTCTACTTGGGTAAGAGGCAAGTGCATAGGCAAGGGCGCGTTTGGCACCGTCAGCGTCGCGCTTCGAAAGCTTAACGCCCAGACGCAAATTTTCGCGGTGAAGTCTGTGGATATTAAAACGGGTCTCCCGGGTCAGCTCGAAGCGTTGGAGAACGAAATTCGGATCCTCCGACGCATGTCCTCGCCGCACGTGGTAACCTTTCTCGGCGAAGACACCACATGCGAGAAGCGGAACCTTCACATGGAGTACTTGCCATGTGGCACTCTCGCTGACCTGGACCCCGACGTGGACGAGTATTTAGTGAGACAATACACGTGGTGCTTGGTGAGCGCTCTGAAGCATGTGCACGGAAACGGCGTCGTGCACTGCGACGTGAAGGGGAAGAACGTCCTTGTAGGAGATGGAGCCAACGGTCGTAACTGCAAGCTCGCCGACTTCGGCTCGGCGATGGAGTTCGACGGGGAAGGTCTCCCGGTGACATCTCCGCGCGGGAGTCCGCTGTGGATGGCACCGGAAGTGATACGCCGGGAGTGTCAGGGTCCGGCGTCGGACGTTTGGTCGTTAGGTTGCACGATGATCGAGATGCTCACCGGAAAACCGCCGTGGGAAGGGAACGCCGTGGACGCGCTGAGTCGGATTGGATTCTCCGGCGAGGTGCCGGGGTTTCCGCGCCGGTTATCGGAGCTAGGCCGGGATTTTCTGGAGAAGTGTTTGAGGAGGGAGCCGTGGCGGCGGTGGAGCTGCGATCAACTGCTGGAGCATCCGTTTCTGTTACCGTGTGGTGTGATCGTGGAATCGTCGCCTCGGTGCGTTCTCGACCGAGTTGACTCAGAGTTCGCTGAGTTCGACGAGGAAGAAGAACAGGAAGAAGAAGAAATGATAACTGAAAGTGAAAATTCGGCGAGGGATAGAATTGGAAAATTGGCTACCAGCGTAGGGGTAAATTGGGAAGCGCCAGGATGGATGATGGTGAGGGAATTGGCTTTCGATGCCGAACCGGTGGTGGCTGACAGTTCTGAGAACGTTAGAGAAGGGTTGATTTTGGAAAATTTTGAGAATTTGAGGGCAGAACGGGGAATTCAGGAAAGGAGAAATTGGGAATGTGAAAGCTTGAAAAACGAAATGGTAAAATTGGGGATATGGCGTTTCGGAGGGAGGCGGTGGTTGTTACAGTACAACCGGCGCTGCCCAAGGCCCACTTCTCCCTCCATCTTCCAGGAATCAAAAACAGCAAAAACAATTTTAGAAAGGATCCTTCCATTTTTCCATTTCCATTTCCACTTCCACCTCGTTCGTTGTGGTGTGTTTCCTTTCTGTTCCTTCCACACACTCTCCTTATTCTTCTCTATCCCCCTCTCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCACTGCTTCAGATCTCGCAGCGCACCACTAACACACCATCTCTCACTTTCGAATTCCCTTGGATCCACGCCCGCCATGGCCGCGAACGCCCCCATCGCCATGCGCGAAGTCTTAACGGTCCGCATTCCCCCACTATCCCGTCGTTTTCTCAGCAATGCCTCATCTCATTCTCCATTTTCTCTTCGTTTTCTCACTCTCCGACACGTTCTTCTTTTTTGCAGTTGGGAAGTGTGGGCATCAACCCGCAGTTTATCACCTTCACGCACGTCACCATGGAATCGGACAAGTACATTTGCATCAGGGAAACCGCGCCGCAGAACAGCGTCGTCATGATCGATATGGCCATGCCCATGCAACCACTTCGACGCCCTATCACCGCTGATTCCGCTCTCATGAACCCTAACGCCAGAATTCTCGCGCTTAAAGCTCAAGTTCCTGGCACTAGTCAGGATCATTTGCAAGTGTTTAACATTGAAACGAAAGCGAAAATGAAATCGTATCAAATGGGCCAACAGGTTGTGTTTTGGAAGTGGATAACTCCGAAGACATTAGGCGTAGTGACTCAGTCATCTGTGTATCACTGGTCAATTGAAGGTGAGGGTGAGCCAGTGAAGGTGTTTGACCGGACAGCTAATTTGGCGAATAATCAGATCATCAATTACCGTTGTGATCCTACTGAAAAGTGGTTGGTTTTGATTGGAATTGCCCCTGGTTCTTCTGAGGTATGCGTTTTCTTCCTGTTGCAACGTCTAGACCTTGCCCTTAGCAATTCCGCTCGTCTTATTCTTGTGTCTAGGCCACAACTTGTAAAAGGAAATATGCAACTTTTCTCTGTGGATCAACAGCGGAGCCAGGCTCTTGAAGCACATGCAGCCTCATTTGCCACATTTAGAGTTGCTGGCAATGATAAGGATTCAACTCTTATTTGTTTTGCATCCAAGAGCATCAATGCTGGACAGGTTACATCAAAGATGCATGTCATTGAACTTGGCGCCCAGCCAGGCAAGCCATCTTTTTCAAAGAAACAAGCCGATCTCTTCTTTCCTCCAGACTTTGCTGATGACTTTCCCGTATCAATGCAGATTTCAAATAAGTATGGTTTGATATATGTTATCACAAAACTCGGTCTTTTATTTGTCTATGATCTAGAGACTGCCACTGCAGTTTATAGAAATCGAATCAGCCCCGATCCGATATTTTTGACAGCAGAGGCCTCGACATCAGGGGGCTTTTATGCTATAAATAGACGTGGCCAGGTGTTGCTTGCTACTGTGAATGAAGCAACCATTGTACCTTTTGTTAGTGGCCAGTTAAATAATTTGGAACTTGCTGTTAGTCTTGCTAAAAGGGGAAACCTCCCTGGTGCAGAAGAATTGGTTGTTAAGCGTTTTCAAGAATTATTTGCTCAGACCAAGTATAAGGAAGCTGCAGAGCTTGCTGCACAATCACCCCAAGGAGTACTTCGAACTCCTGATACTGTTGCTAAATTTCAGAGTGTACCTGTGCAAGCTGGGCAAACGCCACCACTGTTGCAATACTTTGGAACTCTGTTAACCATGGGAAAACTCAATGCTTTTGAGTCACTGGAACTGTCACGACTTGTTGTAAATCAGAACAAAAAGAATCTTTTGGAAAATTGGCTGGCAGAGGATAAACTTGAATGCAGTGAGGAGCTTGGTGACCTTGTGAAGACGGTTGATAATGACCTTGCTTTGAAAATTTATATCAAAGCTAGAGCAACACCAAAAGTTGTTGCAGCTTTTGCAGAGAGGAGAGAATTTGACAAAATCCTGATATATTCAAAGCAGGTTGGATATACACCTGATTACATGTTCCTTCTTCAAACAATTTTACGAACAGACCCCCAGGGTGCTGTAAATTTTGCTCTGATGATGTCTCAAATGGAAGGAGGATGCCCCATAGACTACAACACAATTACTGATCTATTTCTTCAGAGGAATTTGATCCGTGAGGCAACGGCCTTTTTGTTGGATGTGCTGAAGCCAGACCTTCCTGAACATGGATATCTTCAAACAAAGGTTTTGGAAATTAATCTGGTAACCTTTCCAAATGTTGCTGATGCTATATTGGCCAATGGCATGTTCAGTCATTACGATCGCCCACGTATTGGACAATTATGTGAAAAGGCAGGCCTTTTCATTCGGGCTCTTCAGCATTATTCTGAGTTGCCAGACATCAAACGTGTCATTGTGAATACACATGCCATTGAGCCGCAGGCTTTAGTTGAGTTTTTTGGTACCCTTTCTCGAGAATGGGCACTAGAGTGTATGAAAGATCTTTTACTTGTCAATCTCAGGGGAAATCTTCAAATAATTGTTCAGAGTATCTTACTAGTACATGATTTGCAGACTGCTAAGGAATATTCTGAGCAGTTGGGTGTTGATGCATGCATTAAACTATTTGAGCAGTTCAAATCCTATGAGGGACTATACTTTTTCTTGGGTGCATACTTGAGCTCTAGTGAGGATCCTGATATTCACTTCAAGTATATTGAGGCTGCTGCTAAAACTGGACAAATTAAGGAGGTTGAGCGTGTAACTAGGGAATCAAACTTTTACGACGCTGAGAAGACAAAGAATTTTCTTATGGAAGCCAAGCTTCCAGATGCACGACCATTGATTAATGTCTGTGATCGTTTTGGATTTGTTCCAGATCTCACCCATTATCTCTATACTAACAACATGCTTCGATATATTGAAGGTTATGTTCAAAAGGTCAATCCTGGAAATGCTCCTCTAGTTGTAGGACAGTTGTTAGATGATGAATGTCCTGAAGATTTTATTAAAGGTCTTATACTTTCCGTACGTTCTCTTCTGCCAGTTGAGCCTTTAGTTGAAGAATGTGAGAAGAGGAATCGTCTCCGCTTGCTTACTCAATTCTTGGAGCATCTTGTAAGTGAAGGAAGCCAGGATGTGCATGTACATAATGCTCTGGGTAAAATAATTATTGACAGCAACAACAATCCCGAGCATTTTCTCACAACCAATCCATACTATGATTCTCGTGTTGTTGGTAAATATTGTGAAAAGCGGGATCCTACCCTTGCTGTTGTTGCTTACAGGAGAGGGCAATGTGATGACGAGCTTGTTAATGTTACTAATAAAAACTCCTTGTTCAAACTCCAAGCAAGATATGTTGTGGAAAGAATGGACTCTGACCTCTGGGAGAAAGTTCTTAATCCTGAGAATGAGTTTAGAAGGCAGTTGATTGATCAAGTGGTGTCCACTGCTTTGCCTGAAAGCAAGAGTCCTGAGCAAGTTTCAGCTGCAGTGAAAGCTTTTATGACTGCCGATCTTCCACATGAGTTGATCGAGCTTCTTGAAAAGATTGTTCTACAAAATTCTGCTTTTAGTGGAAATTTTAATCTGCAAAATTTGCTGATCCTTACTGCAATCAAGGCAGATCCTTCAAGAGTTATGGATTACATTAATAGGTTGGACAACTTTGATGGACCTGCAGTAGGGGAGGTAGCCGTGGAAGCACAACTATATGAGGAGGCGTTTTCTATTTTCAAGAAATTTAACTTGAATGTTCAGGCTGTTAATGTCCTGCTGGATAACCTCCAGACAATTGATCGTGCTGTGGAGTTTGCTTTCCGAGTTGAAGAAGATGCTGTTTGGAGCCAGGTGGCTAAAGCACAACTTAGGGAAGGCTTAGTGAGTGATGCAATTGAGTCATTCATTCGTGCAGATGATTCAACTCATTTCTTAGAGGTTATTAAGGCTGCTGAAGATGCAGATGTATACCATGACCTGGTGAAGTATCTTCTCATGGTTAGGCAGAAGACCAAAGAGCCCAAGGTGGACAGTGAGCTCATTTATGCTTATGCTAAGATTGACCGTCTTGGAGAAATTGAAGAGTTTATATTGATGCCAAATGTTGCCAATTTACCAAATGTTGGAGACCGCTTGTATGATGAGACATTGTATGAGGCGGCAAAAATTATATTTGCTTTTATTTCTAACTGGGCTAAGTTGGCAGTCACATTGGTGAAGCTTAAACAGTTCCAAGGAGCTGTTGATGCAGCCAGGAAAGCAAACAGTTCAAAAACATGGAAGGAAGTCTGTTTTGCCTGTGTTGATGCTGAGGAATTCCGCTTAGCTCAGATTTGTGGTCTCAATGTCATCATTCAGGTGGATGATTTGGAGGAGGTTAGCGAGTTTTATCAGAACAGAGGATGCTTCAATGAACTCATATCTCTAATGGAAAGTGGGTTAGGATTGGAGCGTGCACATATGGGTATCTTTACTGAGTTGGGAGTTCTATATGCAAGATATCGACCCGAGAAGCTAATGGAACACATTAAGTTGTTCTCAACTCGGCTTAACATTCCAAAGCTTATTCGGGCATGTGATGAACAGCAGCACTGGAAAGAACTCACTTACCTATTCATTCAATATGATGAGTTCGATAATGCTGCAACCACTGTCATGAATCACTCTCCAGAAGCATGGGACCACATGCAATTCAAAGATGTTATAGTTAAAGTTGCAAGTGTAGAGCTCTACTATAAGGCTGTTCACTTCTACTTACAAGAGCATCCAGATGTAATAAATGATATGTTAAATGTGATTGCTCTTCGTGTGGACCACACTCGTGTAGTAGATATACTACGGAAGGCTGGCCACCTTAGATTAGTTAAGCCGTACATGGTTGCAGTTCAAAGCACCAATGTATCTGCTGTCAATGAAGCTCTGAATGAAATTTATGTCGAGGAAGAGGACTATGACAGACTTCGAGAATCAATAGATCTGCATGACAACTTTGATCAGATAGGTCTTGCGCAGAAGATTGAGAAGCATGAACTTCTTGAAATGAGGCGTGTTGCTGCATACATTTACAAGAAAGCAGGAAGATGGAAGCAATCCATTGCTTTGTCAAAGAAAGACAATCTTTACAAGGACTGCATGGAAACATGCTCTCAATCTGGTGATCGTGAACTCTCAGAAGATTTGCTTATCTACTTTATTGAGAAGGGAAAGAAAGAGTGTTTTGCATCATGCCTCTTTGTCTGTTATGATATTATCCGGCCAGATGTTGCTCTTGAGCTAGCTTGGATGAACAACATGATTGATTTTGCTTTCCCATATCTCTTACAGTTTATTAGAGAGTATTCAAGCAAGGTGGATGAGCTTATTAGGGACAAAATTGAAGCTCAAAAGGAGGAGAAAGCTAAGGAAAAGGAGGAGAAGGAAGTGATTGCTCAACAAAATATGTATGCCCAGTTGCTACCGCTTGCTTTGCCGGCACCTCCGATGCCAGGAATGAGTGGAGGCTATGCCCCTTCCCCTCCTCCAATGCCTGGAATGGGTGGAGGCTATACTCCTAGCCCTCCCCCACCACCCATGGGTGGAATGGGGATGCCACCAATGCCTCCTTTTGGCATGCCTCCAATGGGGGGCGGCTACTAA 6843 0.4502 MVSTWVRGKCIGKGAFGTVSVALRKLNAQTQIFAVKSVDIKTGLPGQLEALENEIRILRRMSSPHVVTFLGEDTTCEKRNLHMEYLPCGTLADLDPDVDEYLVRQYTWCLVSALKHVHGNGVVHCDVKGKNVLVGDGANGRNCKLADFGSAMEFDGEGLPVTSPRGSPLWMAPEVIRRECQGPASDVWSLGCTMIEMLTGKPPWEGNAVDALSRIGFSGEVPGFPRRLSELGRDFLEKCLRREPWRRWSCDQLLEHPFLLPCGVIVESSPRCVLDRVDSEFAEFDEEEEQEEEEMITESENSARDRIGKLATSVGVNWEAPGWMMVRELAFDAEPVVADSSENVREGLILENFENLRAERGIQERRNWECESLKNEMVKLGIWRFGGRRWLLQYNRRCPRPTSPSIFQESKTAKTILERILPFFHFHFHFHLVRCGVFPFCSFHTLSLFFSIPLSSLSLSLSLSLSLSLSSLLQISQRTTNTPSLTFEFPWIHARHGRERPHRHARSLNGPHSPTIPSFSQQCLISFSIFSSFSHSPTRSSFLQLGSVGINPQFITFTHVTMESDKYICIRETAPQNSVVMIDMAMPMQPLRRPITADSALMNPNARILALKAQVPGTSQDHLQVFNIETKAKMKSYQMGQQVVFWKWITPKTLGVVTQSSVYHWSIEGEGEPVKVFDRTANLANNQIINYRCDPTEKWLVLIGIAPGSSEVCVFFLLQRLDLALSNSARLILVSRPQLVKGNMQLFSVDQQRSQALEAHAASFATFRVAGNDKDSTLICFASKSINAGQVTSKMHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVSMQISNKYGLIYVITKLGLLFVYDLETATAVYRNRISPDPIFLTAEASTSGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLELAVSLAKRGNLPGAEELVVKRFQELFAQTKYKEAAELAAQSPQGVLRTPDTVAKFQSVPVQAGQTPPLLQYFGTLLTMGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQGAVNFALMMSQMEGGCPIDYNTITDLFLQRNLIREATAFLLDVLKPDLPEHGYLQTKVLEINLVTFPNVADAILANGMFSHYDRPRIGQLCEKAGLFIRALQHYSELPDIKRVIVNTHAIEPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQSILLVHDLQTAKEYSEQLGVDACIKLFEQFKSYEGLYFFLGAYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELVNVTNKNSLFKLQARYVVERMDSDLWEKVLNPENEFRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYEEAFSIFKKFNLNVQAVNVLLDNLQTIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIESFIRADDSTHFLEVIKAAEDADVYHDLVKYLLMVRQKTKEPKVDSELIYAYAKIDRLGEIEEFILMPNVANLPNVGDRLYDETLYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARKANSSKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEFYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLFIQYDEFDNAATTVMNHSPEAWDHMQFKDVIVKVASVELYYKAVHFYLQEHPDVINDMLNVIALRVDHTRVVDILRKAGHLRLVKPYMVAVQSTNVSAVNEALNEIYVEEEDYDRLRESIDLHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDCMETCSQSGDRELSEDLLIYFIEKGKKECFASCLFVCYDIIRPDVALELAWMNNMIDFAFPYLLQFIREYSSKVDELIRDKIEAQKEEKAKEKEEKEVIAQQNMYAQLLPLALPAPPMPGMSGGYAPSPPPMPGMGGGYTPSPPPPPMGGMGMPPMPPFGMPPMGGGY 2280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02163 2280 SUPERFAMILY ARM repeat 1614 1757 IPR016024 -
Vimu2g02163 2280 Pfam Clathrin-H-link 922 987 - -
Vimu2g02163 2280 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1999 2142 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 FunFam Serine threonine protein kinase putative 3 311 - -
Vimu2g02163 2280 SUPERFAMILY ARM repeat 1010 1355 IPR016024 -
Vimu2g02163 2280 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1262 1404 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1555 1700 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1409 1548 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 SUPERFAMILY ARM repeat 1758 2093 IPR016024 -
Vimu2g02163 2280 SUPERFAMILY Clathrin heavy-chain terminal domain 541 896 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Vimu2g02163 2280 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1704 1845 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 Gene3D - 538 930 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Vimu2g02163 2280 SUPERFAMILY ARM repeat 1463 1628 IPR016024 -
Vimu2g02163 2280 ProSiteProfiles Protein kinase domain profile. 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g02163 2280 CDD STKc_MAPKKK 5 259 - -
Vimu2g02163 2280 Pfam Protein kinase domain 7 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g02163 2280 FunFam Clathrin heavy chain 1616 1758 - -
Vimu2g02163 2280 Gene3D Transferase(Phosphotransferase) domain 1 1 315 - -
Vimu2g02163 2280 Pfam Region in Clathrin and VPS 1412 1538 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 Pfam Region in Clathrin and VPS 1707 1843 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 Pfam Region in Clathrin and VPS 1852 1993 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 Pfam Region in Clathrin and VPS 1110 1243 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 Pfam Region in Clathrin and VPS 2002 2141 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 Pfam Region in Clathrin and VPS 1555 1693 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 Pfam Region in Clathrin and VPS 1263 1402 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 FunFam Clathrin heavy chain 2104 2200 - -
Vimu2g02163 2280 Pfam Clathrin, heavy-chain linker 897 920 IPR015348 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Vimu2g02163 2280 Coils Coil 2179 2216 - -
Vimu2g02163 2280 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1104 1250 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1850 1996 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 FunFam Clathrin heavy chain 1012 1349 - -
Vimu2g02163 2280 SUPERFAMILY ARM repeat 898 1053 IPR016024 -
Vimu2g02163 2280 Pfam Clathrin propeller repeat 549 584 IPR022365 -
Vimu2g02163 2280 Pfam Clathrin propeller repeat 683 706 IPR022365 -
Vimu2g02163 2280 MobiDBLite consensus disorder prediction 2232 2263 - -
Vimu2g02163 2280 Gene3D - 2104 2201 - -
Vimu2g02163 2280 Coils Coil 2039 2059 - -
Vimu2g02163 2280 SUPERFAMILY Protein kinase-like (PK-like) 4 260 IPR011009 -
Vimu2g02163 2280 Coils Coil 274 294 - -
Vimu2g02163 2280 ProSitePatterns Protein kinases ATP-binding region signature. 11 36 IPR017441 GO:0005524
Vimu2g02163 2280 FunFam Clathrin heavy chain 1759 2098 - -
Vimu2g02163 2280 SMART CLH_2 1999 2158 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 SMART CLH_2 1850 1996 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 SMART CLH_2 1555 1700 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 SMART CLH_2 1704 1845 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 SMART CLH_2 1104 1246 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 SMART CLH_2 1262 1404 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 SMART CLH_2 1409 1548 IPR000547 GO:0006886|GO:0016192
Vimu2g02163 2280 PANTHER CLATHRIN HEAVY CHAIN RELATED 544 2060 - -
Vimu2g02163 2280 SMART serkin_6 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g02163 2280 Gene3D Tetratricopeptide repeat domain 1759 2098 IPR011990 GO:0005515
Vimu2g02163 2280 Gene3D Tetratricopeptide repeat domain 1619 1758 IPR011990 GO:0005515
Vimu2g02163 2280 Gene3D Tetratricopeptide repeat domain 1464 1618 IPR011990 GO:0005515
Vimu2g02163 2280 FunFam Clathrin heavy chain 535 930 - -
Vimu2g02163 2280 FunFam Clathrin heavy chain 1464 1615 - -
Vimu2g02163 2280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02163 Vimu-Chr2 16357459 16371489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02163 5 334 MAP Kinase Kinase Kinase AT2G30040 59.118 1.25e-114 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vimu2g02163 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02163 K04646 - gmx:100784651 3137.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02163 2 16357459 16371489 Vimu2g02163 2 16357459 16371489 ECH
Vimu2g02163 2 16357459 16371489 Vimu1g01474 1 12760875 12763680 PCT