Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02157 ATGCATTTCTATGAATCTATGGATTTCAGATTCAGCACACCGAATCACCCACCAATAGAAAACATCCTTGGTGGAAAACTGAATGTATGGGACCTCTTCTCTAAAAGAAAACACACAAAATCTAAACTCAAACATCATTTCATCTCTCTGTCAGAGCTATTCCTAGGAATACTCCTAATCATGGCGGAGTGTGTGACGGACATGGCTCAGGCTGCTCTTTGCCGCAACACCACCGCTGCAGCACATTTGAAACTGATTTCCATCTTCACAATCTTCGTAACCAGCGTGATGGGTGTGTCCATGCCTGTCATGCTAGCAAGATACTTTCAAGGAAAGTCTCTCTATGATATAGCTATCTTGGTAATCAAATGTTTTGCTGCGGGTGTTATTCTTGCCACCTCATTGGTTCATGTGTTACCGGACGCATTTGCCGCACTCTCCGATTGTCAGGTGGCATCGCAACATCCTTGGAAGGATTTTCCCTTTGCTGGCCTGGTGACTCTGGGTGGGGTTCTGTTGGCTCTCCTCGTGGACACCGTTGCCAGCTCTCACGTGGAGCATACGCACTACGCGCCGGTGGAAACGGAGGAGAAGGAGGGTGGCGCTCGCTCATTGAGTATCGAGCTGGTAAGTGGCGGCGGTGGCGGCGGTGAAGCGGATAGGGTTGAAGAGTTGATGAGGTTGAAGCAGAAGCTGGTGTCTCAGGTGTTGGAGATAGGTATAATCTTTCACTCTGTTATCATCGGAGTCACTATGGGAATGTCCCAGAATGTTTGCACCATTCGCCCTCTCGTTGTTGCTTTGTCATTTCATCAGATTTTCGAAGGCTTAGGTCTTGGTGGTTGCATAGCTCAGGCAGGGTTTGGATTTGGAACAACTGCATACATGTGTTTCATGTTTTCTGTGACAACACCAGTGGGGATAATTTTGGGAATGGTGTTATTCTCAGTGACTGGTTATGATGATAGTAACCCGAAAGCTTTGATCATGGAAGGATTACTGGGTTCAGTTTCTTCAGGGATACTGATTTACATGGCTCTTGTTGATCTCATAGCAGTTGATTTCTTTCATAACAAGCTCATGAACTCTAATTTGTGGCTCAAAAAATTATCTTTTCTTGCTTTAACTCTTGGCTCTGCTTCTATGTCTGTTCTAGCACTTTGGGCCTGA 1170 0.459 MHFYESMDFRFSTPNHPPIENILGGKLNVWDLFSKRKHTKSKLKHHFISLSELFLGILLIMAECVTDMAQAALCRNTTAAAHLKLISIFTIFVTSVMGVSMPVMLARYFQGKSLYDIAILVIKCFAAGVILATSLVHVLPDAFAALSDCQVASQHPWKDFPFAGLVTLGGVLLALLVDTVASSHVEHTHYAPVETEEKEGGARSLSIELVSGGGGGGEADRVEELMRLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVVALSFHQIFEGLGLGGCIAQAGFGFGTTAYMCFMFSVTTPVGIILGMVLFSVTGYDDSNPKALIMEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSNLWLKKLSFLALTLGSASMSVLALWA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02157 389 PANTHER ZINC/IRON TRANSPORTER 80 383 - -
Vimu2g02157 389 NCBIfam ZIP zinc/iron transport family 69 389 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vimu2g02157 389 Pfam ZIP Zinc transporter 82 386 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02157 Vimu-Chr2 16263159 16264639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02157 61 389 Inorganic Solute Cotransporters AT2G30080 64.943 9.01e-152 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02157 K14709 - gmx:100784745 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02157 2 16263159 16264639 Vimu2g02157 2 16263159 16264639 ECH