Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02144 ATGTCCAATCGACTTTCATCTAAAAGATCATGGCAGAAGAAGCAATGTTATAAGATCTACTTGGAAACTCAAAGAAAAAGTCTTGAGAATGGAATAGCAGATCTTAAACCTGAACTTGGTTGCTGTCAGAAGCAGAAGCAGCTCTTGGAGCAGGAACAACTGAAATTGCGCCAGAGAATGGAAATTATTCAGAACGAGATTATGCTCAAAGATGCTGAGATTGAGATGAACAAAAGCGAAGTGAATAGGCTGAGGGAATGCTGGGTGATGATGCAACAAGGGCTATTGCAAGCACCTCTTCTTAGTTATTGCAATATTGATCCGATGCAGCATTGGTACAACCATCCAAACTCATATCAAGTTGCAGGAAATGGAGTGGGGAGTTCATACATACCAGCAGAGCCGAGCCAGATGTGGATACCTGATGCTGTGCCGAATATGCATGGAATGAACACGAGTCTGCCTGACCACTACATTGGATCCATGATAAATGATATAAGCGGAACCTTTCCGAACTCTGACCTTAATTAG 531 0.4237 MSNRLSSKRSWQKKQCYKIYLETQRKSLENGIADLKPELGCCQKQKQLLEQEQLKLRQRMEIIQNEIMLKDAEIEMNKSEVNRLRECWVMMQQGLLQAPLLSYCNIDPMQHWYNHPNSYQVAGNGVGSSYIPAEPSQMWIPDAVPNMHGMNTSLPDHYIGSMINDISGTFPNSDLN 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02144 176 PANTHER BASIC LEUCINE ZIPPER 34 1 99 - -
Vimu2g02144 176 Coils Coil 46 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02144 1 85 bZIP Transcription Factor Family AT2G40620 30.588 4.32e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02144 - K16541 vra:106752667 305.834