Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02143 ATGGAGCAAAGTGAAGGGAGAGGAAAGGGAAAGAATGTTCAGGATTCTTCTTCAAATGCTGAACAATCCCAAGCTGAAATGGGTCCTGTGGGACAAAACGTCATGGATCCTCAACTGAGGAGAGTATTCTCAAACAGAATTTCTGCCCAAAGATCAAGACAGAAGAAGGTGAAGTTAGTTGAGGAGTTGGAAAACCGTGCCAAAATGTTGCAGGATCAACTAGCCCAACTTCAATCAATGGAGGCTCACCAGCAAAGCCGAATGCACAGTTTAATGATAGAAGAGCAGACATTGTTCCATGAAATGGAATATCTACAGAAAAAGGCAATACTCAGAGATGCTGAAGATGAGAAGAACAGGAAAAAAAAGAGTAGGCTGGAGAAACTTCGAGATATTAGGCAACAGCAATTGCTTAATCTGCATGATCCTTTTGCTGGATTGTCCATTGATACATCCTCAAATCAAGGAGATGGAACACAGTCTTCATCAAGGCAAGAGCTGGGCGTAGCTGCTGCGGTGGATGAAATGATGGATCAGACGAATCTTTCAATGGCAACTGCTCGCAATCCCAATCCTTAA 579 0.4301 MEQSEGRGKGKNVQDSSSNAEQSQAEMGPVGQNVMDPQLRRVFSNRISAQRSRQKKVKLVEELENRAKMLQDQLAQLQSMEAHQQSRMHSLMIEEQTLFHEMEYLQKKAILRDAEDEKNRKKKSRLEKLRDIRQQQLLNLHDPFAGLSIDTSSNQGDGTQSSSRQELGVAAAVDEMMDQTNLSMATARNPNP 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02143 192 MobiDBLite consensus disorder prediction 1 37 - -
Vimu2g02143 192 SUPERFAMILY Leucine zipper domain 39 89 IPR046347 GO:0003700|GO:0006355
Vimu2g02143 192 MobiDBLite consensus disorder prediction 143 192 - -
Vimu2g02143 192 Pfam bZIP transcription factor 39 79 IPR004827 GO:0003700|GO:0006355
Vimu2g02143 192 MobiDBLite consensus disorder prediction 146 167 - -
Vimu2g02143 192 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 40 55 IPR004827 GO:0003700|GO:0006355
Vimu2g02143 192 Gene3D - 38 92 - -
Vimu2g02143 192 Coils Coil 53 80 - -
Vimu2g02143 192 MobiDBLite consensus disorder prediction 10 29 - -
Vimu2g02143 192 PANTHER BASIC LEUCINE ZIPPER 34 11 161 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02143 6 127 bZIP Transcription Factor Family AT2G21230 29.231 8.54e-08 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vimu2g02143 bZIP_1 5.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02143 - - vun:114188513 236.498