Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02138 ATGTCCATGGCTGGTACTGAGCAAGGTGACAGAAGCTCCTCCATCATCACCATACCCCTTTTGGAAGATGAAAGAGTGCACCGAGTGAATGGCTCAGATGAGGTGCTGGATGCTAAAACTTGGGATCTGCACACATCTCATGAGGGTAACACCTCCTTTTTCAAGACCTGCTTCAATCTCATTAATGCCCTCTCAGGAGTTGGTATTATCTCAATGCCTTATGCTCTGGCATCTGGTGGATGGTTAAGCATATCACTACTATTTGTGATAGCCATTGCTTGTTGTTACACTGGGATGTTGGTGAAAAGATGCATGGACATGGACCCTGATATCAGAACCTTCCCCGACATAGGTCAACGTGCATTTGGATACAAGGGGAGGCTAATGGTATCGATCGCCATGAATTCGGAGCTCTATCTGGTTGTAACAGGCTTTCTGATTTTAGAGGGTGACAATCTTGACAAATTAGTACCAAATATCCAAGTTAACCTAGCAGGGGTTACAATTGGTGGTGCAACAATTTTTACCATAGTTGCTGCCCTTGTCATTCTTCCCAGTCTTCTGTTAGAGGATTTGAGCATGCTGTCTTATGTGTCTGCAAGTGGGGCTTTGGCTTCTTCCATCTTCCTCCTCTCTCTGTTTTGGAATGGTACCATTGATGGCACTGGATTTCATGCAAAGGGAAAACTCTTCAGATTCACTGGAATACCTGCTGCTGCCAGTTTATATGCCTTCTGTTATAGTGCACATCCTATTCTTCCTACTCTCTACAATTCCATGAGAGACAAAACTCAGTTCTCCAGGGTTCTGTCAACGTGCTTTTCAGTATGCACTCTTGGTTATGCAGCAGCAGGTGTTTTGGGGTACCTGATGTTTGGACAAGAGGTTGAATCACAGGTGACATTGAACCTACCAACAAGCAAGTTCAGTTCACATGTGGCAATATTCACGACCTTGGTAAATCCTATAACGAAGTATGCATTGATGCTTACCCCAGTAATAAATGCTGTGAAAAACAAGATTTCATGGCACTACAACAAAAGATTGACACACACACTGGTTAGCACCTCCATTCTCGTAAGCTCTCTAATTGTAGCTGTGGCCATACCCTTGTTTGGATATCTGATGTCACTGATTGGGGCATTGCTGAGTGTGTCAGCTTCAATTTTAGTACCATCAGTGTGCTACTTGAAGATTTCAGGAGCATACAAGACATTTGGCTCTGAAATGATCATCAACTATTCAATAATAGTATTGGGGGTTACTATTGCTGTTGTGGGTACTTATACATCTCTTGTAGATATAGCTCATAACTTGTAA 1320 0.4295 MSMAGTEQGDRSSSIITIPLLEDERVHRVNGSDEVLDAKTWDLHTSHEGNTSFFKTCFNLINALSGVGIISMPYALASGGWLSISLLFVIAIACCYTGMLVKRCMDMDPDIRTFPDIGQRAFGYKGRLMVSIAMNSELYLVVTGFLILEGDNLDKLVPNIQVNLAGVTIGGATIFTIVAALVILPSLLLEDLSMLSYVSASGALASSIFLLSLFWNGTIDGTGFHAKGKLFRFTGIPAAASLYAFCYSAHPILPTLYNSMRDKTQFSRVLSTCFSVCTLGYAAAGVLGYLMFGQEVESQVTLNLPTSKFSSHVAIFTTLVNPITKYALMLTPVINAVKNKISWHYNKRLTHTLVSTSILVSSLIVAVAIPLFGYLMSLIGALLSVSASILVPSVCYLKISGAYKTFGSEMIINYSIIVLGVTIAVVGTYTSLVDIAHNL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02138 439 PANTHER AMINO ACID TRANSPORTER 44 430 - -
Vimu2g02138 439 Pfam Transmembrane amino acid transporter protein 50 431 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02138 Vimu-Chr2 16076647 16080265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02138 36 435 Amino Acid or Auxin Permease AAAP Family AT3G28960 53.367 8.97e-154 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02138 K15015 - gmx:100784690 731.48