Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02133 ATGGCTGCAGCGTTGGAGTGCTGGTCGCGCCGCACCACCAGTGACGAGGACGACGCATTCCTCACCGCGCATTCCTCGCAACCCCGAGACTCTTCTTCTTCGTCTTCCCCCTCTTCCTCTCTCGTCCACAAGAAGCTCCTCAAACTCACGCGCAACGTCTCCGAGGCTCTCTCCTCCCTCAGAAACTCCCTTACAGCTATGAATGATTCTTCCAAACCCGACGCACCTCGCAACCTTGTGTGGACCACCGTCGTGCGCAATCTCAGCCACATATACCCCGGGACCCATCTCCCTGAGAAGCTTGTCTGCAACATTCGCAAGCACTATGACTCCCTGCCTCTCAGGTTCGGATCCCAACCTCAGTTTGCTCGGTTGCGATGGAAGTTGTGTTCTATTCTGAATGTGAATGCGGAGAAATTATTGTATGGTCGATCTCTATTTCACACCCCACCGAGTTATTCTCAGGCAGGGTTTGATGTGAAAGATGTGTTTCTTCACATGAAGCTGATGGAGCAAGCTCTGGAAGATGAGCAGGCTGCGGTTTTGATTCAAGAGGAGGGTGATGGTGAGATTCAACTTCAGGGGTCTTTGTTCAAGTTGACATTCGCTTGCAACTCTCCTATTTCATGGCCCGCAATGTCACGAGCGTTGGATGGTTACTCCATTTGCTGCAAGAAGATTCAGATATTTGAGAAGAAAGGATTCACCCTTGGAATTGTGCTTCTTCTTGTACTGTCAAGTGGTCAGCATGATAAGTTGGTCAGGACCCGGGTTGAAAATGCTCTCAAGGTATCCATGAAGAGGCCTAAAGCCAGCGGTGTGAAGCTTCCCTTTGGTCTTTGTGGATGTCAAGAAGAGAACACCAAAGGGAGAGGACATGGAGAGATTGAGGAAGATGGTGGTGATGCATGTTGTGGAAATGGGTTTGATAATTTGAGCCAAAAGATTCAGCTTCAGGTGCCATTACCGAGTTCATCTTTTCTTGTAGTGGTAGATGAATGGCAGACTATTCAATCAGGTGGAGATGATATTGAAAAATGGTTGTTGAACTCAGATCGTCTTGAGTTTGCAGAACAGATTGGGCCCAATTCGTATAAGGGGATGTACATGGGAAAAAAAGTTGGCATCGAGAAGCTTAGAGGGTGTGATAAAGGGAACTCTTACGAGTTTGAGCTCAGGAAAGACCTGCTGGCATTGATGACCTGTGGTCATAGAAATATTATGCAATTTTTTGGTGTTTGTGTGGATGAAAACTATGGGTTATGTGTATTGACAAAACTTGTGGAAGGTGGATCTGTTCACGACTTAATGTTAAAGAATAAGAAGCTTTCGAGCAAGGATGTTGTAAGAATTGCAGTTGATGTGGCTGAGGGGATGAAGTTTATGAATGATCACGGTGTTGCATACAGAGACCTTAATACGCAGAAGATTGTTTTGGATAAGCATGGGAATGCTTTCTTGGGTGATATGGGTATTGTCACTGCTTGCGAGAGTGTTGGAGAGGCAATGGAGTATGAAACTGATGGTTATCGGTGGCTAGCACCAGAGATAATTGCTAGTGATCCAGAGAGTGTAACAGAGACATGGATGAGTAATGCTTATAGTTTTGGAATGATTATTTGGGAGATGGTAACTGGTGAGGCAGCATATTCTGCATATTCACCCGTGCAAGCAGCAGTTGGCATTGCTGCTTGTGGTCTTAGACCTGAAATCCCCAGGGACTGCCCTCAAACTCTAAAGTCTCTCATGATAAAGTGCTGGAACAACACCCCTTCAAAACGTCCTAACTTCTCTGAAATTTTGGCCATATTGCTACGACAAAACAACTACAATAGATCGATGCAACCTATTCTCACTCTTAACTGGGCACATAGAAATTTACGCTTATCTGCTACAATTATCACATTGAAGTGA 1914 0.4566 MAAALECWSRRTTSDEDDAFLTAHSSQPRDSSSSSSPSSSLVHKKLLKLTRNVSEALSSLRNSLTAMNDSSKPDAPRNLVWTTVVRNLSHIYPGTHLPEKLVCNIRKHYDSLPLRFGSQPQFARLRWKLCSILNVNAEKLLYGRSLFHTPPSYSQAGFDVKDVFLHMKLMEQALEDEQAAVLIQEEGDGEIQLQGSLFKLTFACNSPISWPAMSRALDGYSICCKKIQIFEKKGFTLGIVLLLVLSSGQHDKLVRTRVENALKVSMKRPKASGVKLPFGLCGCQEENTKGRGHGEIEEDGGDACCGNGFDNLSQKIQLQVPLPSSSFLVVVDEWQTIQSGGDDIEKWLLNSDRLEFAEQIGPNSYKGMYMGKKVGIEKLRGCDKGNSYEFELRKDLLALMTCGHRNIMQFFGVCVDENYGLCVLTKLVEGGSVHDLMLKNKKLSSKDVVRIAVDVAEGMKFMNDHGVAYRDLNTQKIVLDKHGNAFLGDMGIVTACESVGEAMEYETDGYRWLAPEIIASDPESVTETWMSNAYSFGMIIWEMVTGEAAYSAYSPVQAAVGIAACGLRPEIPRDCPQTLKSLMIKCWNNTPSKRPNFSEILAILLRQNNYNRSMQPILTLNWAHRNLRLSATIITLK 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02133 637 MobiDBLite consensus disorder prediction 19 39 - -
Vimu2g02133 637 MobiDBLite consensus disorder prediction 18 39 - -
Vimu2g02133 637 Gene3D Transferase(Phosphotransferase) domain 1 347 609 - -
Vimu2g02133 637 ProSiteProfiles Protein kinase domain profile. 354 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g02133 637 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 74 604 - -
Vimu2g02133 637 Pfam Protein tyrosine and serine/threonine kinase 388 603 IPR001245 GO:0004672|GO:0006468
Vimu2g02133 637 SUPERFAMILY Protein kinase-like (PK-like) 345 623 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02133 Vimu-Chr2 16007563 16011708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02133 337 604 MAP Kinase Kinase Kinase AT2G17700 30.403 2.26e-48 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Vimu2g02133 PK_Tyr_Ser-Thr 3.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02133 - - gmx:100811417 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02133 2 16007563 16011708 Vimu2g02133 2 16007563 16011708 ECH
Vimu2g02133 2 16007563 16011708 Vimu1g01689 1 17227957 17233469 PCT