Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02111 ATGACAAGGGTTTACCCTGCACACCGTTTGGTACAAGCGTACAATGGATGGCAGAAACTCTTCGATCCTTCTTCGATCGTGCAAAAACAACAAACTATTGAGCTTACTACAAATGACAATTCCACAATTTCTTTCCCCATTGTTTGCCATTCAATATTTAAATCTCATTCTGTAGGCATATTTTATACTGACAATCTTTTTTCTCACTCCTTCACACTCCTATTGTTGAATCTCGCTGTCATCAGCATCATGACACGTTGTATCAGATTTTGTCTTAAGCCCTTGAGACAACCTTTTTTCGTATCTCAGTTAATAGGTGGAATCATCGTTGGACCTTCCCTTCTGGCGAGAAGTACATGGTACCAAAGTCACATGACAAGCGAGACAACAACGTTCCTAATAAACAACCTTGGAATAATGGGATTCGTGTACTTTATTTTCATTTATGGTGTGAAGATAGATCTAGGTCTTCTAAAAAGAACAAGGAAAGTGCATATATCTACTGCAATTCTTGGCATTATAATTCCGACAACGTCAGTGTTGGCTGTGGCACTAACGATGAGAAAGAACATGGACGAAAATTTGGCAAAGTTTTCGTCACTAGGATCAATTGCGTCATACCTGGGGACATCATCATTCCTTACTATCTACCATATCCTGGAAGAGTTTAACCTTCTAAATTCAGATGCTGGGCGATTATCATTGTCCATATCAATAATTGGTGACACATTTGGTTTGCTTGTTTTCTTAGCGTTTGAGGCAACAGACATCGGAGAATTTGGGGTAATGGGCACGATGTGGTTTGTGTTATCTCTTTCGTTGGTCATAACGTTCCTTTTATTTGTTGTTAGACCTGCAATGATAAGGATCAACAAGAATACTGCTGAAGGGCACCCAGTGAAAGAATACTTTGTAGTTGTGATGCTTCTAGGGGCTTTTGTTATGGGTTTCGTAACTGACTTTTTGGGCATGGCCATTGCCACTGGACCATTCGTTTTAGGGTTGGTAATTCCAGATGGGCCTCATGTGGGAGCAACACTTGAAAAGAAAACCTCAGCAATTCTGGGTGATTTCTTTCTACCATTCTCCTATATTATGGTTGGAACATATACTGATTTCTATGCCATGACTGCTTCTGGTTGGTCCGCCTTATCACCATTGATTATCATGATCATTGTTGGCTACCTTTTGAAATTCTTTACCACTTGGATTAGTTTGCATCTCTTTCGAATGCCACTCAGGGATGGACTAACCGTCAGCCTCATCCTGAACTTAAGAGGCCTAACTGAACTTATATTGTTTGTATTTTATATGGAACAAAGCTTCGTAAAGGTCCCGGGCTTTTCATTGTTGATATTTATGACATTATCATTGACAGCAATTTCTTGTCCTTTGATCTCTATATTGTATGATCCAACAAAGCCATACATGGTGAACCAAAGGAGAACCATTCAACATCACCCTCCTGACAAAGAGTTCAGATTAGTGTTATGCATTTTTGAACGGGATGACATACATGGTCTCACACGTCTACTTGATATCTCCAATCCAACAGAAAACATCCCCTTTGAGATTTCAGTTGTTAGACTGAGTGAGCTCGTAGGTCGAGTCAACCCTTTGTTCATAGATCATGAAAAGCAACAAGTGCCTCCCAATTATCAATGGTCTAGCACCATAGACGTGCTTGAACGTCATCAACAACTCAAAGAACCCTACATGAATTTTCATTTCTTCACGGCTGTCACCCCAAAAAAGACCATGTTTCGAGATGTATGCGAGCTTGCCCTAGAAGAAGAAGCTTCTTTGATCATCTTACCTTTCAACAGGAATGTCCATAACAATGTGCATTCGCAAGTCTTGGCCAATGCACCTTGCACGGTGGCAATTTTCGTTGACAAGGGTCTTCTTAAGAGCAGTAACACCTTAGGCAGTTTTCAACGAAGTAAATATCGATTTGCTGTGTTGTTTCTTGGGGGTGGAGATTCTAGAGAGGCTCTTGTTTATGCAGATAAGATGCTTGGTCGGCCTCAGGTGTCTCTGACAGTTATAAGGTTTCTGACTCACAACTTTGTAGGGTACAACGAAATCGAGAAGAAGCTTGATGATGGAATTGTGACTTGGTTCTGGGTTAAGAATGAGATTAATCAGAGAGTGGTGTATAGAGAAGTGGTGGTTAGAAATGGAGAAGAAACGATCGCAGCGATTCAAGCTATGAATGATGGTGCTTTTGATCTTTTGATAGTGGGAAGGAAACATGGGATAAACCCTATTCTTCTCACTGGTTTATCAGATTGGATTGAAACTGAAGAGTTGGGACTCATAGGAGATTATGTTTCCTCTGCAGATTTTTTTGGCTCCGCTTCTGTCTTAGTTCACGACAATTTAGGTCAGCAATCCGTCAGGGCGATTCCAATTGGTTGGCTTTCATCAACTCAATCTAAACAGCTTAAAAGCCCATCAACTAGGCAATCCATCAGCTCGAGAGGTCGGTTTAGAGAGCTTGACCTAGAGGATCTCAGTAGTGAAGCTCGACGTGAAGGAGCTCAAACTAAAGGAGAACGGCTTGGAGAGGTCGACTTGAAGTGGTCAATCGGCCTAAAAAGGGTGCCTCTAAGAGCTCGACCTAAAGAGTTTGGTCTCGAGGAGCTCGATTTGGAGGAAGTCAACCTGTTCCAAAATATCCATTATAATTGA 2694 0.412 MTRVYPAHRLVQAYNGWQKLFDPSSIVQKQQTIELTTNDNSTISFPIVCHSIFKSHSVGIFYTDNLFSHSFTLLLLNLAVISIMTRCIRFCLKPLRQPFFVSQLIGGIIVGPSLLARSTWYQSHMTSETTTFLINNLGIMGFVYFIFIYGVKIDLGLLKRTRKVHISTAILGIIIPTTSVLAVALTMRKNMDENLAKFSSLGSIASYLGTSSFLTIYHILEEFNLLNSDAGRLSLSISIIGDTFGLLVFLAFEATDIGEFGVMGTMWFVLSLSLVITFLLFVVRPAMIRINKNTAEGHPVKEYFVVVMLLGAFVMGFVTDFLGMAIATGPFVLGLVIPDGPHVGATLEKKTSAILGDFFLPFSYIMVGTYTDFYAMTASGWSALSPLIIMIIVGYLLKFFTTWISLHLFRMPLRDGLTVSLILNLRGLTELILFVFYMEQSFVKVPGFSLLIFMTLSLTAISCPLISILYDPTKPYMVNQRRTIQHHPPDKEFRLVLCIFERDDIHGLTRLLDISNPTENIPFEISVVRLSELVGRVNPLFIDHEKQQVPPNYQWSSTIDVLERHQQLKEPYMNFHFFTAVTPKKTMFRDVCELALEEEASLIILPFNRNVHNNVHSQVLANAPCTVAIFVDKGLLKSSNTLGSFQRSKYRFAVLFLGGGDSREALVYADKMLGRPQVSLTVIRFLTHNFVGYNEIEKKLDDGIVTWFWVKNEINQRVVYREVVVRNGEETIAAIQAMNDGAFDLLIVGRKHGINPILLTGLSDWIETEELGLIGDYVSSADFFGSASVLVHDNLGQQSVRAIPIGWLSSTQSKQLKSPSTRQSISSRGRFRELDLEDLSSEARREGAQTKGERLGEVDLKWSIGLKRVPLRARPKEFGLEELDLEEVNLFQNIHYN 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02111 897 Gene3D - 72 475 IPR038770 -
Vimu2g02111 897 PANTHER CATION/H + ANTIPORTER 49 793 - -
Vimu2g02111 897 Pfam Sodium/hydrogen exchanger family 80 461 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02111 Vimu-Chr2 15795829 15800577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02111 46 801 Antiporter Super Family AT5G37060 38.750 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02111 K26731 - gmx:100783296 1017.3