Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02105 ATGGAGGTAGGTCAGGAAAACTTCATTCGCAGTACCATAAGTGTTGCAACCAATTCGCTTGGAGAGCCTTTCATATGTCATAGCACAGCTAATCAAATCAACTCCAAGGGAATCTGGTTTGGAGATGACCCACTTTCTTATTCTCTCCCCATTTTCTTGCTCCAACTTTTTCTCATGTTCATCTTCACCCATTTCTTTTACATTATTCTCAAGCCTTTTGGTCAACCGGCTGTTGTTTCTCAAATTCTTGGTGGTATGACTTTAGGTCCTTCTATTCTTGGACACAGTGCAACATTTTCTGAGAAGGTTTTCCCATTAAAAGAGAGAAGTGTGCTTGATACAGTGACTTTTTTTGGATTTATGTTATTCATCTTCTTAAGTGGGGTAAAGATAGATCCAACCATCACTTTTAGATTAGGTAGAAGGAATTGTGTTATAGGAATTGCAGGCTATTTTGTTCCTTACATTCTTGCCAAAGTGGTTTTCTATATCCTCAACCATTCCGCATCATTTGATAGTGATTCTTATAGGATGCTCTATGTTGTGATAGAAATTCAATGTATTTCAGCCTTTCCAGTAATCACTCGCTTTCTTTCTGAACTTCAGATCCTCAATTCAGAGATTGGGAGGTTGGCCGCTTCTTCTTCATTAGTGGCTGAGGCTTGCTTCATTGTAAACATGGCATTAACATTTTTTATTAAGTTATCTTTAACAAAGTCAGTAGTAGTATCTATTGGATCTTTCTTGTCCTCCATTGTACTTTTTTTGTTCATCATATATGTAGTTCACCCTGCTGCATTATGGGCAATTCAACAATCACCAGAAGGAAAACCTGTGGAAGAAATTTACATTTGTGCAGTTCTTGTAACACTAATGATTTGTGGACTCCTAGGTGAAACCATTGGCATAAGTGCACTTGTTGTGTCTTTCTTTATTGGGCTAGCTATACCTGATGGGGCTTTGTTGCCTCTCCTTTACCTTAGGATGCCAATTCGAGATGCCTTTGCTCTTGGTTTTATAATGAACATCAAAGGCACGGTTGAAATGGCCTTGTTGATTACATTGAAATTGAAAGATATGGTGAATGATGAATGCTTTACACTTATGGTTCTAAATTTGCTTTTTGTAAGCGGGATTGTGTCCCCTATTGTAAAAAGTCTATATGATCCTTCAAGGAGGTTTCTTGCTTACAAAAGGAGGACACTTATGCATCACAACAATGATGAACAGTTGCGAATACTAGCTTGCATTCATAAACAAGAAAATGTTCTGGGTATTTTAAACCTCCTTTCTGCTTCCAATCCCACTAAAGAAAGCCCTATTGATTTAGTTGTGCTCCAACTTATTAAGCTTGTGGGGCGATCTTCCTCTGTTCTAGTTGCACATGTGCCGTGTAAGAAGTTCGGGGAACTTCCTACTCTAAGTGATCAGATTTTTAACTCATTCGACAAGTTTGAAGATGCATACAAGGGCAAGATCACCATACATAGCTATAAAGGCATTTCTCCCTATGCTACAATGCATAATGATGTGTGCTACTTGGCACTTGAAAAGAGAACAACTTTTATTATATTACCCTTTCATAAGCGATGGATATTTGGGAGGACAACTGAGTCGTCTTTTCCTTTTCAGCAAATTAACAAACATGTTTTAGAGAAGGCTCCTTGCTCAGTTGGTGTCCTTATTGATCGTGGCAATCAGAAGATGTTTTGGTGTGGCCACACAAAGGAATCAACATATCATGTGGCTGTGTTTTTCTTTGGGGGTGCAGATGATCGAGAAACACTTGCATATGCAAAGCGTATGTTGGATCAACCTTATGTCTACATTACGCTTTTTCTTTTTTCATCTTCAACTGACATTGTTGGAGGAACAGAAACAAGCAAAATGCTTGACACAGAAATCTTAAGTGAATTTAGGCTTAAGGCCTTCCGAAATGAGAGAGTTTCTTTCAAAGATGAGATGATAACCTCTGGAAGAGATTTACTTTCAGTTGTTGAATACATGGAGAGTTGTTATGACCTTGTTCTGGTTGGGAGGAAGCATGGTGATTCAAAAATAATGTCAGAACTTAACAAATGGAAGAATGGGGAATTGGGAGTTGTTGGAGAGATTCTTGTCTCTTTAAATGTTGGAGCTCAAACATCTATTTTAGTGGTGCAACAACAAACCAGATATTGGGGATCACGTAATCTAGAGGACTCTATAAGAAAAGCTGGAATCATACTGGGTCCTATAATTCTAGGTCGACACAGATCATGTTATGAAGCGTTATTTCCAATGGAAGGGCATATGACACTATCAACATTCGCTGAATTTGGCATGATGGTCCATTTCTTTAAGATGGGGGTGCAGATTGATCCCAAGCAAATCTTGAAGATTAAAAAGCAAGCAATAGTGATTGGTGTAGTTGGTCACGTGTCATCTTTAGCATGTAGTGGTGTAATTTTAAATATTTTTAGATCAATCTACCCAGAGGAAACTAAAGACCCAAGTGTTCTTGTTTTACTGATATCATCTTCTGTGACTGCGTTTCCTGTTGTAACTTCATTTCTAACAGAGATGAATATTATTAATTCAGAGGTTGGACGCATAGCTGTATCCACTTCTCTGGTCAGTGATTCATTCATGTGGGTATTTTATTTTGTGGTAATCAGAGGACAAGCTCCTTTTGTTGTTGCCTTTTGTTTTGGCTTGATCTTACCTGATGGTCCTCCTTTAGGTTCTCTTCTCACAGAAAAGCTTGACATTGTCGGTTCTACTTTGATAGTTCCATCTTATTGTACCATTGTTGCCCTTAAAACCAGTCCTCGTTCATTAGCAGAATTCAAGTCACTCACCATTGAGCTTATCTTACTTGCAATGTACGTAGGCAAGTTTCTGGGCACCATTTTCTCCTCACTTCTTTTTCAGATTGATTTTTCGGATTCTTTTGCATTGTCTCTAATCATGTGTTGTAAAGGCCTCACGGATCTCTCCATCCTCAACTTATTATTGAATATGAAGGCAATAGAAGAGAAAACTTTCACCCTTGGTATATTTACCATGGTGATAGTAACTGGTTCTGCAAGTCTTTGTGTTTATCACATGTATGATCCTTCAAAAAAGTATGGATCTTATATTAAAAAGACAATCAGGAATTCTCAGCCAGAACCAGATCTCAAAATACTTGCATGTGTCCATCATGAAGAAAATGTATATCCAATCGTTAACCTTTTGCAAGCAGCTAACCCCAGAGAGGATACACCACTCTCAGTCTTTGTCCTTCACCTTGTGGAGCTTTCAGGCAGTGTCATTCCCATTCTTACAGAAGATAACATTGCTAACAAGTCATCTCAACACATACACAACGTCTTTGATCAATTTCACATGCACAACATCGGTTCTGTCAACCTTCATTTCTTCACAGCAAAAACCCCACTTGTCAGCATGCCCTACGATGTATGCAACCTTGCAATGCAGTTCACTTCTAACATTGTCATTATGCCATTTCATAAATGGTACACTAAAGATAATATTGAGTACTTAAATGCTTCCATCAGGACACTCAACCAACATGTTCTAAAGAAAGCTCCTTGCTCTGTTGGAATCTTTGCAGATCGGGGTCATATCAATGACAAAGGATTTGTGTTATATGAGAAGCTGATTTGTGAAATTGCAATGATCTACTTGGGTGGAGGTGATGATCAAGAGGCATTGTCTTTTAGTTTACGTATAGCTCAGCATCCAAATGTGAGACTCACGGTATTTTGGTTTAGGGTTAAAACGCAAAGCAAACAAAGGAAAACGAAGAACCCTTACATTGACTTGAGGGAGCATATACGTTATAGTAGTTACCTTGAAGGAAAAGTAACATTCAAGGAAGAGGTTGTTGAAGATGGAGCAGATACAACAAAAGCTATTCTAAGAATAGAGAAACTCTTTAGTTTGATCATAGTTGGTAAGCATCATGTGAAAGACTCTCCATGTACATTAGGATTGACAGAATGGTGTGAACTTCCTGAGCTTGGTCCACTTGGAAATCTCTTAGCCACATCAGATTTTACATGTTCGTTTTTTGTGGTACAAGAACAACCAAGGTGGTTCTAG 4089 0.3835 MEVGQENFIRSTISVATNSLGEPFICHSTANQINSKGIWFGDDPLSYSLPIFLLQLFLMFIFTHFFYIILKPFGQPAVVSQILGGMTLGPSILGHSATFSEKVFPLKERSVLDTVTFFGFMLFIFLSGVKIDPTITFRLGRRNCVIGIAGYFVPYILAKVVFYILNHSASFDSDSYRMLYVVIEIQCISAFPVITRFLSELQILNSEIGRLAASSSLVAEACFIVNMALTFFIKLSLTKSVVVSIGSFLSSIVLFLFIIYVVHPAALWAIQQSPEGKPVEEIYICAVLVTLMICGLLGETIGISALVVSFFIGLAIPDGALLPLLYLRMPIRDAFALGFIMNIKGTVEMALLITLKLKDMVNDECFTLMVLNLLFVSGIVSPIVKSLYDPSRRFLAYKRRTLMHHNNDEQLRILACIHKQENVLGILNLLSASNPTKESPIDLVVLQLIKLVGRSSSVLVAHVPCKKFGELPTLSDQIFNSFDKFEDAYKGKITIHSYKGISPYATMHNDVCYLALEKRTTFIILPFHKRWIFGRTTESSFPFQQINKHVLEKAPCSVGVLIDRGNQKMFWCGHTKESTYHVAVFFFGGADDRETLAYAKRMLDQPYVYITLFLFSSSTDIVGGTETSKMLDTEILSEFRLKAFRNERVSFKDEMITSGRDLLSVVEYMESCYDLVLVGRKHGDSKIMSELNKWKNGELGVVGEILVSLNVGAQTSILVVQQQTRYWGSRNLEDSIRKAGIILGPIILGRHRSCYEALFPMEGHMTLSTFAEFGMMVHFFKMGVQIDPKQILKIKKQAIVIGVVGHVSSLACSGVILNIFRSIYPEETKDPSVLVLLISSSVTAFPVVTSFLTEMNIINSEVGRIAVSTSLVSDSFMWVFYFVVIRGQAPFVVAFCFGLILPDGPPLGSLLTEKLDIVGSTLIVPSYCTIVALKTSPRSLAEFKSLTIELILLAMYVGKFLGTIFSSLLFQIDFSDSFALSLIMCCKGLTDLSILNLLLNMKAIEEKTFTLGIFTMVIVTGSASLCVYHMYDPSKKYGSYIKKTIRNSQPEPDLKILACVHHEENVYPIVNLLQAANPREDTPLSVFVLHLVELSGSVIPILTEDNIANKSSQHIHNVFDQFHMHNIGSVNLHFFTAKTPLVSMPYDVCNLAMQFTSNIVIMPFHKWYTKDNIEYLNASIRTLNQHVLKKAPCSVGIFADRGHINDKGFVLYEKLICEIAMIYLGGGDDQEALSFSLRIAQHPNVRLTVFWFRVKTQSKQRKTKNPYIDLREHIRYSSYLEGKVTFKEEVVEDGADTTKAILRIEKLFSLIIVGKHHVKDSPCTLGLTEWCELPELGPLGNLLATSDFTCSFFVVQEQPRWF 1362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02105 1362 Gene3D - 889 1036 IPR038770 -
Vimu2g02105 1362 Gene3D - 51 323 IPR038770 -
Vimu2g02105 1362 Gene3D - 738 888 IPR038770 -
Vimu2g02105 1362 Pfam Sodium/hydrogen exchanger family 891 1021 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu2g02105 1362 Pfam Sodium/hydrogen exchanger family 58 319 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu2g02105 1362 Pfam Sodium/hydrogen exchanger family 739 885 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu2g02105 1362 PANTHER CATION/H + ANTIPORTER 319 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02105 Vimu-Chr2 15739875 15748422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02105 739 878 Antiporter Super Family AT2G13620 36.170 1.43e-17 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02105 K26731 - gmx:102665255 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02105 2 15739875 15748422 Vimu2g02105 2 15739875 15748422 ECH