Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02097 ATGGAAAACATGAAGACACCCCTTGTCCTTGATATGAAGGATGTTGTAATAGTTAAACCCTGCAAGCCCACACCATCTGAACTTCTTCCTCTGTCCACCATTGACAGAGATCCTGTTCTCAACATTCTGTGTCAGACCATTTATGTTTACAAAGAAAATCTTGATTCCCCAAATGGCCAACTTGATCCTGCTCAGGTGATAAAAGAAGCCCTCTCAAAGGTTTTGGTTTACTATTATCCTCTTGCTGGGAAGATAGTAACATTTGATGATGGAAAACTTGGAATCAACTGCAATGCTGATGGAGTTCCATTTTTGGAGGCAAGTGCTAACTGTGAACTCTCTTCTCTTCACTATCTGGAAGGGATCGATGTTCCAACTGCACAGAAATTGATCATTAATAATGATAACCCTTTTGAAGATGAAAAGCACGCCCTGGCTTTCATGGTGACCAAGTTTCTCTGTGGGGGTTTCACTCTTGGCATGGGGTTGTCACACAGTGTTTGTGATGGGTTTGGTGCATCTCAATTCTTCAGAGCCTTGGCTGAACTTGCATGTGGAAAAAGTGAGCCCTCGGTGAAACCTGTGTGGGAGAGGGAGAGACTAATGGGGACACTTCTTAAGGAACCACTCCAATTTCCCATTGATGAGACTTCAAGGGCAGTTTCACCATTTTGGCCAACCAATGAGATTTCACATGAATGCTTTAACTTCAACGCGAAGAGCATACAAAGACTCAAAATGGAACTGATGAAGGAAAGTGATGATGTGAAGGAAAGCTTCACAACTGTTGAAACACTTGGTGCCTATGTTTGGAGGTCAAGGGCTAGAGCTTTGGAATTGAACTCTGATGGGAAAACTATGTTGTGTTTAGCTGTAGGGGTGAGACGTCTGTTGAATCCACCCTTGCCTGAAGGGTATTATGGGAATGCTTTTGTGGGTTCATATGTGGTGCAAACAGTGAAAGAACTTGATGAAAGACCACTCTCAGAGATTGTGAAGCTCATCAAAGAGAGCAAAAAGCTTCCTTCCAATAATGAGTATATCAGTAACACAATAAACATGTTAGAGACAATTAGACAGACAAACATAAGGGTTGAAGGAACATGTGCATCTGTGGTGTTAACAGATTGGAGACAGCTGAGTTTGTTGGAAGAAGTGGACTTTGGATGGAAGGCTTCAGTGAATATAATACCAGTTCCTTGGAATATGTTAGGGTATGTGGACTTATGCCTTTTCTTGCCTCCTAGTAACTTGGATCCTTCAATGAAAGCAGGAGTTAGGGTCTTTGTTTCCCTCCCCAAAGCTTCCATGCCCAAGTTTAGGGAAGAGATGGAGGCACTGAAGCTTACGACTAGAGCTGATGATAATAGCACCTACCAATGA 1383 0.4259 MENMKTPLVLDMKDVVIVKPCKPTPSELLPLSTIDRDPVLNILCQTIYVYKENLDSPNGQLDPAQVIKEALSKVLVYYYPLAGKIVTFDDGKLGINCNADGVPFLEASANCELSSLHYLEGIDVPTAQKLIINNDNPFEDEKHALAFMVTKFLCGGFTLGMGLSHSVCDGFGASQFFRALAELACGKSEPSVKPVWERERLMGTLLKEPLQFPIDETSRAVSPFWPTNEISHECFNFNAKSIQRLKMELMKESDDVKESFTTVETLGAYVWRSRARALELNSDGKTMLCLAVGVRRLLNPPLPEGYYGNAFVGSYVVQTVKELDERPLSEIVKLIKESKKLPSNNEYISNTINMLETIRQTNIRVEGTCASVVLTDWRQLSLLEEVDFGWKASVNIIPVPWNMLGYVDLCLFLPPSNLDPSMKAGVRVFVSLPKASMPKFREEMEALKLTTRADDNSTYQ 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02097 460 Gene3D - 226 444 IPR023213 -
Vimu2g02097 460 Gene3D - 9 209 IPR023213 -
Vimu2g02097 460 PANTHER ACYL TRANSFERASE 4 10 446 - -
Vimu2g02097 460 Pfam Transferase family 16 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02097 Vimu-Chr2 15700516 15701898 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02097 10 407 Monolignol Biosynthesis Gene Families AT5G48930 27.488 1.14e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02097 K20240 - gmx:100801843 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02097 2 15700516 15701898 Vimu2g02097 2 15700516 15701898 ECH