Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02084 ATGGCTACTCAAAACATACCCTTCGAACTTGTCATGAAAGAAGTTGTTCTTATCAAACCATCAAAACCAACACCTTCCTCTACTCTTCCTTTATCTACACTGGACAACATACCTGTCCTTTATAGCATATGCCACACCCTTCATGTATTTCAATCAAAAACTCATGATCTTGATGAATCTGGTTGCCCTAATCACCAACTGCTAGATCCTGCTGATGTGATTAAAGCAGCAATTTCAAAGGCTTTATTCTATTATTATCCTCTTGCAGGTAGGCTAGTAAAGCACACTGATGGAAACTTCATGATCAACTGCAGTGCAGAAGGTGTTCCATTATTGGAGGCCAGTGCTAGTTGCAGTCTTTCTTCTCTCCATTTCTTGGATGGCACTGACATGGAATGTGCAAAACAGTTAGTGTTTGACCTTCCTCCTCAAGATGAAAGTGGCTACCAATATCCCTTGGTGTTCAAGGTGACAACGTTTACTTGTGGGGGGTTCACCATTGGAATGGGGCTGTTACATACTGTTGGTGATGGCGTTGGAGCATCTCAGATCTTGAAAGCCATCATGGAGCTTTCAAGGGGGGAAAGTGAGCCCTCTGTGAAGCCTGTGTGGGAGAGAGAGAGGCTAAAGGGATCAATCACTAAACAGCCATTGCTAATTGATTCAATGGATGAGGCCTCGGCTGCAGTTTCACCCTTTCTTCCAACTGAAATTCTCGTGCAGGAGTGCATTAAGGTTAACAGTGACAGCATCAGAAGACTGAAGATGAGTTTGAGGAAGGAATCAGGTGAAAACGAAAACTTCACTACTTTTGAATCACTAGCTGCATATGTGTGGAGGGCTAAATCTAGGGCTTTAAAATTCAACTTAGATGGGAAAGTTAAGCTGACTATGGTAGTTGGAGCGAGAAAGCACTTGCAGGATCCTTTGCCTGAAGGGTATTATGGAAATACTGTTGTGGATATTGTCGTTGTTTTAACAGTGAGGGAACTGAATGAAAGGCCACTGTATGAGATCGTGAAACTCATAAAAGAAAGGAAGAAAGTTGCTTGTAACAGTGATTATGTCAGAAACTACATCAACACTTTAGAGACAGGAGTAACGAATTCCAACATTGGAGGGAGTGGTGCAAATACTGCATTGACTGATTGGAGGTACTTGGGGTTCTTGGAAAAGTTAGATTTTGGAGTTAAAGAACTTGTGAATATTTTACCAGTCCCTTCTGGCATGTTTAAATCCGTTGATTTATGCATTTTGTCATCTCTTTGCAACTGGGATTCTTCAATGGAGGGAGGGGTTAGTATTTTTCAGTCCCTACCAGCTGCTGCGTTGTTCAAGTTCAAGGAGGAGATGGAGGCTCTCAGCCTCTTGACTTGA 1377 0.4234 MATQNIPFELVMKEVVLIKPSKPTPSSTLPLSTLDNIPVLYSICHTLHVFQSKTHDLDESGCPNHQLLDPADVIKAAISKALFYYYPLAGRLVKHTDGNFMINCSAEGVPLLEASASCSLSSLHFLDGTDMECAKQLVFDLPPQDESGYQYPLVFKVTTFTCGGFTIGMGLLHTVGDGVGASQILKAIMELSRGESEPSVKPVWERERLKGSITKQPLLIDSMDEASAAVSPFLPTEILVQECIKVNSDSIRRLKMSLRKESGENENFTTFESLAAYVWRAKSRALKFNLDGKVKLTMVVGARKHLQDPLPEGYYGNTVVDIVVVLTVRELNERPLYEIVKLIKERKKVACNSDYVRNYINTLETGVTNSNIGGSGANTALTDWRYLGFLEKLDFGVKELVNILPVPSGMFKSVDLCILSSLCNWDSSMEGGVSIFQSLPAAALFKFKEEMEALSLLT 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02084 458 Pfam Transferase family 14 453 - -
Vimu2g02084 458 Gene3D - 8 219 IPR023213 -
Vimu2g02084 458 PANTHER ACYL TRANSFERASE 4 10 452 - -
Vimu2g02084 458 Gene3D - 229 451 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02084 Vimu-Chr2 15527845 15529509 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02084 12 364 Monolignol Biosynthesis Gene Families AT5G48930 26.870 3.14e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02084 K20240 - gmx:100783730 457.218