Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02081 ATGGTTTCAAGGATTCACAAGAGAACAGCCATGTACAGGAACCTACAGCTGCTTCGTTCAATCAGATACTCTCACTCGCCACCTAAAACTTCAGTGTTACTGGATGTGTCAAATTGTATACAAGGTTTAAAGCAAAAGCTTCAAGAATTGAACGAATTAAAAGTGGCAACAGCACGAAAAATCGCGGACTATGATCCAATGCCTAAGCTTGAAGTTGAAATGCAAGAAGAGGGTTTTGTGATAAAGGTGCTTAGTCAAAGGAGTTGCCAGGGGTTGCTGGTGTTTATACTGGAAGCCTTTGAAGAGTTGGGTCTTGATGTGCTCCAGGCTAGGGTTTCTTGTGCAGACAGCTTCAGTTTAGAAGCTTTAGGAAACAAAAACAATGAAGATACTGGTGCTTTGGATGCAAAACTAGTTGAAGAAGTAGTGTCTAAAGCCATTCAAAACTGGAGAGAAGTTTCACAGATATAA 471 0.4076 MVSRIHKRTAMYRNLQLLRSIRYSHSPPKTSVLLDVSNCIQGLKQKLQELNELKVATARKIADYDPMPKLEVEMQEEGFVIKVLSQRSCQGLLVFILEAFEELGLDVLQARVSCADSFSLEALGNKNNEDTGALDAKLVEEVVSKAIQNWREVSQI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02081 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 144 - -
Vimu2g02081 156 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02081 Vimu-Chr2 15474329 15475504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02081 - - gmx:100527278 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02081 2 15474329 15475504 Vimu2g02081 2 15474329 15475504 ECH
Vimu2g02081 2 15474329 15475504 Vimu6g01670 6 15346189 15347576 ECH
Vimu2g02081 2 15474329 15475504 Vimu1g00841 1 5657738 5659286 ECH
Vimu2g02081 2 15474329 15475504 Vimu6g00131 6 1694097 1694984 ECH
Vimu6g00131 6 1694097 1694984 Vimu2g02081 2 15474329 15475504 ECH
Vimu2g02081 2 15474329 15475504 Vimu1g01314 1 10615108 10616727 PCT