Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02079 ATGGCTTTGAATTCACGTTGCAACGTGGTTTTCTTCTTTGTTTTCTTTTCTCTACTTGCCATAGCCTCTTCTCAGCTTTCTTCAGATTTCTATGCAACATCATGCCCCACTGCTCTCTCCACCATCAAATCTGCAGTGAAAACTGCTGTTTCCAAAGAGCGTCGCATGGGAGCATCCTTGCTTCGTCTTCATTTCCATGACTGCTTTGGGTGTGATGCATCAGTTCTTCTAGACGACACTTCGAGCTTCACGGGAGAGAAATCAGCTGCTGCAAACGTAAATTCTCTAAGAGGTTTTGATGTAATCGACGACATCAAAAGTCAGTTGGAAAGTGCTTGTCCAGGAATTGTTTCCTGTGCAGATATTCTTGCAGTTGCTGCTCGTGATTCTGTCGTAGCATTGGGTGGTTCATCATGGAGTGTTGGCTTAGGCAGAAGAGATACAACCACTGCAAGTAAAGATGCTGCCACCACAGATATTCCATCCCCTCAATTGGATCTGAGTGATCTCATAACAGCTTTTTCAAATAAGGGGTTTACCACCAAAGAGATGGTAGTTCTCTCAGGAGCTCATACAACAGGGCAAGCGAAATGCCAGTTCTTCCGGGGTAGGATTTATAATGAAAGCAACATTGATTCAGATTTTGCAACATCAACACAGTCAAATTGCCCTAGCACTGATGGCGACAGCAACCTGTCCCCACTTGATGTGACCACCAATGTGTTATTTGACAATGCTTATTTCAAGAATCTGGTGAACAAGAAAGGGCTTCTGCATTCAGATCAGCAACTCTTCAGTGGTGGTTCCACAGATTCTCAGGTCACTACCTACAGCACAAGCTCTTCAGCTTTCTATGCAGACTTTTCTAGTGCCATGGTCAAAATGGGAAACCTCAGTCCTTTAACAGGAACCAGTGGCCAAATCCGTACAAATTGCCGCCTAGTTAACTGA 951 0.4437 MALNSRCNVVFFFVFFSLLAIASSQLSSDFYATSCPTALSTIKSAVKTAVSKERRMGASLLRLHFHDCFGCDASVLLDDTSSFTGEKSAAANVNSLRGFDVIDDIKSQLESACPGIVSCADILAVAARDSVVALGGSSWSVGLGRRDTTTASKDAATTDIPSPQLDLSDLITAFSNKGFTTKEMVVLSGAHTTGQAKCQFFRGRIYNESNIDSDFATSTQSNCPSTDGDSNLSPLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTTYSTSSSAFYADFSSAMVKMGNLSPLTGTSGQIRTNCRLVN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02079 316 SUPERFAMILY Heme-dependent peroxidases 25 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 PANTHER PEROXIDASE 72-RELATED 19 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 CDD secretory_peroxidase 25 315 IPR033905 GO:0004601|GO:0042744
Vimu2g02079 316 ProSiteProfiles Plant heme peroxidase family profile. 25 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Vimu2g02079 316 Gene3D - 29 313 - -
Vimu2g02079 316 Gene3D Peroxidase, domain 2 161 295 - -
Vimu2g02079 316 FunFam Peroxidase 29 169 - -
Vimu2g02079 316 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 Pfam Peroxidase 43 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 FunFam Peroxidase 161 295 - -
Vimu2g02079 316 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02079 316 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02079 Vimu-Chr2 15462878 15464557 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02079 21 316 Peroxidase AT5G05340 62.667 2.14e-138 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02079 K00430 - gmx:100811634 514.998