Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02077 ATGGCTTCTATTATCCAATATCTGCTTGTGCTTGTTCTAGCCACTTTCGTCACATTTATGCTCCCTTCCAATGCACACCTCAGTGCTAATTTCTATGACAATGTTTGTCCCAAGGCATTACCAATCATAAGATCAGTTGTTCAGCGAGCAATTAGTCGTGAACCACGCATTGGAGCATCACTGCTGCGTCTGCATTTCCATGACTGCTTTGTTAATGGATGTGATGGATCAGTTCTGTTAGATGACACAAGGAACTTCACAGGCGAGAAAACAGCCCTACCAAATCTAAACTCCATAAGAGGGTTTGAAGTGGTTGATGAGATTAAGGCAGCAGTTGACAAAGCTTGCAAAGGCCATGTCGTTTCGTGTGCTGATATCTTAGCAACAGCTGCTCGAGATTCTGTGGCCATCTTGGGAGGTCAAAACCTATGGTACTCTGTATTACTAGGCAGAAGAGACGCCAGAACTGCAAGCAAAGATGCTGCAAACACCAACCTTCCTGCTCCATTTTTCAACTTCTCACAGCTTCTCAGCAGTTTCAAATCTCACGGAATGAACCTCAAGGATTTAGTGGCACTCTCTGGTGGCCACACCATAGGGTTTGCAAGGTGCATCACCTTCAGAGACCGCATCTACAACGACACCAACATTAACCCTACTTTTGCAGCGTCTTTGCGCAGAACATGCCCTAGTGTTGGTGGTGATAGCAACTTGGCTCCATTGGACCCAACCCCTGAAAATGTTGACACTTCATACTTCAAGGAATTGCTCTGCAAAAAGGGTCTCCTTCACTCTGACCAAGAACTCTACAAGGGGGATGGCAGTGAAAGTGACAAGCTGGTGAAGCTTTATAGCATGAACCCTTTTGCATTTGCTAACGATTTTAAGGCTTCCATGATCAAGATGGGGAAGTTGAAGCCTCTCACCGGCAGAAAGGGAGAGATCAGACGCAATTGCAGAAGGATTAACTAA 972 0.4547 MASIIQYLLVLVLATFVTFMLPSNAHLSANFYDNVCPKALPIIRSVVQRAISREPRIGASLLRLHFHDCFVNGCDGSVLLDDTRNFTGEKTALPNLNSIRGFEVVDEIKAAVDKACKGHVVSCADILATAARDSVAILGGQNLWYSVLLGRRDARTASKDAANTNLPAPFFNFSQLLSSFKSHGMNLKDLVALSGGHTIGFARCITFRDRIYNDTNINPTFAASLRRTCPSVGGDSNLAPLDPTPENVDTSYFKELLCKKGLLHSDQELYKGDGSESDKLVKLYSMNPFAFANDFKASMIKMGKLKPLTGRKGEIRRNCRRIN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02077 323 Gene3D - 30 320 - -
Vimu2g02077 323 FunFam Peroxidase 167 302 - -
Vimu2g02077 323 SUPERFAMILY Heme-dependent peroxidases 27 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Vimu2g02077 323 Pfam Peroxidase 44 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Vimu2g02077 323 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Vimu2g02077 323 Gene3D Peroxidase, domain 2 167 302 - -
Vimu2g02077 323 PANTHER PEROXIDASE 72-RELATED 24 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 FunFam Peroxidase 30 172 - -
Vimu2g02077 323 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02077 323 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02077 Vimu-Chr2 15454686 15455913 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02077 25 323 Peroxidase AT5G05340 58.940 5.80e-125 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02077 K00430 - gmx:100816056 551.206