Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02075 ATGGCTTCCTCTTTCTGTTCATTAGCATTAGCTCTGTTACTACTGCTTCTTACTGCAGGAACTTCTTCGGCTAACCTCTCAAACAACTTCTATTCTAAGACATGTCCCAATCTTTTCAACACAGTCAAATCTGTTGTTAAATCTGCTGTGGCCAAAGAACCTCGTATTGGAGCATCTATTCTTCGCCTCTTCTTCCATGATTGCTTTGTTGATGGTTGTGATGGGTCATTACTGCTTGATGACACTCCATCGTTCTTGGGAGAGAAAACTGCAGCTGCTAACAACAATTCAGTGAGAGGTTTTGAAGTAATTGATGACATCAAGTCTAGGGTGGAGAAACTGTGCCCTGGTGTTGTCTCGTGTGCTGATATCTTGGCCATTGCTTCCCGTGATTCTGTCGTCCTTCTTGGAGGACCATTTTGGAAAGTGAAGGTTGGAAGAAGGGATTCTAGAACAGCAAATTTCACTGCTGCTAACACTGGTGTAATTCCACCTCCAACCTCTAATCTGACCAACCTTATTAACACGTTTCAAGCTCAAGGGCTCTCTACTAAAGACATGGTTGCCTTATCTGGAGCTCACACAATCGGAAAAGCAAGATGTACTAGTTTTAGAGATCACATATACAATGGAACTAACATTGACAGAAAATTTGCACTGGTGAGGCAGAGAAAGTGTCCAAGAACTAATGGCACAGGAGACAATAATCTAGCAGTTCTAGATTTGAGAACTCCGAAGCATTTTGACAACAACTACTTCAAGAACCTACTGAACAAAAAGGGTCTCCTGAATTCTGATCAGGTGCTTTTCAATGGTGGAGCCACTGATTCACTGGTCAGAACTTACAGTGAGAATAACAAGGTCTTTGATTCTGACTTTGTTACAGCAATGATCAAGATGGGAGATAACAAACCCTTAACTGGGTCACGAGGAGAGATTAGGAAGAATTGCAGGAGAGTGAATTAA 966 0.4193 MASSFCSLALALLLLLLTAGTSSANLSNNFYSKTCPNLFNTVKSVVKSAVAKEPRIGASILRLFFHDCFVDGCDGSLLLDDTPSFLGEKTAAANNNSVRGFEVIDDIKSRVEKLCPGVVSCADILAIASRDSVVLLGGPFWKVKVGRRDSRTANFTAANTGVIPPPTSNLTNLINTFQAQGLSTKDMVALSGAHTIGKARCTSFRDHIYNGTNIDRKFALVRQRKCPRTNGTGDNNLAVLDLRTPKHFDNNYFKNLLNKKGLLNSDQVLFNGGATDSLVRTYSENNKVFDSDFVTAMIKMGDNKPLTGSRGEIRKNCRRVN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02075 321 Gene3D Peroxidase, domain 2 164 300 - -
Vimu2g02075 321 Gene3D - 29 321 - -
Vimu2g02075 321 Pfam Peroxidase 42 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 FunFam Peroxidase 164 300 - -
Vimu2g02075 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 CDD secretory_peroxidase 25 320 IPR033905 GO:0004601|GO:0042744
Vimu2g02075 321 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Vimu2g02075 321 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Vimu2g02075 321 SUPERFAMILY Heme-dependent peroxidases 25 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 ProSiteProfiles Plant heme peroxidase family profile. 25 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 PANTHER PEROXIDASE 72-RELATED 23 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g02075 321 FunFam Peroxidase 29 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02075 Vimu-Chr2 15439826 15441805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02075 10 321 Peroxidase AT5G58400 66.346 4.85e-156 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02075 K00430 - gmx:100813384 513.842