Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02057 ATGAATGAAATTAGCACCCTTTGTGGGATTGAAGCATGTGCCATAATATATTCTCCAAATGATCCTCAGCCAGAGGTTTGGCCATCTGAGCCAGAAGTACAAAGGGTGCTTTCCAAGTTCATGGAAATGTCTGAGCAGAAACAATGCAGAAAGATGTTGAATCAGGAGAGCTTGTTGAAGCAAATAATCATCAAAGGCCAACAGCAGTTGACAAGACAAAGGAATGATAACAGGAAGAAAGAAATGACTCATCTTATGTTTCAGTACTTGAATGTTGGGAGGGTTTTTGACAATCCTAGTTTGATAGATTTGAATGATCTCTCATGGCTCATTGATCAGAACCTGAATGAAATAAAACAGAAGATGACTATGATCCAAATCCAAGAAGGGGCACCAGTGACTGAAAATGGAGGAGAACGTGGACACATGCATCATGTTCAAGGGCTAGAGAACAGGACAGACACCATTCAGAACCAATATTGA 483 0.4037 MNEISTLCGIEACAIIYSPNDPQPEVWPSEPEVQRVLSKFMEMSEQKQCRKMLNQESLLKQIIIKGQQQLTRQRNDNRKKEMTHLMFQYLNVGRVFDNPSLIDLNDLSWLIDQNLNEIKQKMTMIQIQEGAPVTENGGERGHMHHVQGLENRTDTIQNQY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02057 160 CDD MADS_SRF_like 1 54 IPR033897 GO:0000981|GO:0000987|GO:0045944
Vimu2g02057 160 Gene3D - 1 62 IPR036879 GO:0003677|GO:0046983
Vimu2g02057 160 SUPERFAMILY SRF-like 2 63 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02057 Vimu-Chr2 15275885 15276842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02057 1 126 Type I MADS-box Gene Family AT5G48670 47.619 8.04e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02057 - - vra:106752446 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02057 2 15275885 15276842 Vimu2g02057 2 15275885 15276842 ECH