Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02034 ATGGTTGTGGGGATATCCTTCTTTGTCCTATTTTCATCCACTCTGAGTCTAGCTTTTCTACTCTCAAAATGGTTCTCAAAAGGTCAAACAAAAAATGTTCCAAAAGGGTCTCTGGGGTACCCTATCATCGGAGAGACCCTTAGTTTTCTTAAAGCACAGAGACAAGACAAGGGTTCTGAATGGTTGGAAGAACGGATATCTAAGTATGGTCCTGTCTTCAAAACCTCCTTAATGGGGTCCACCACAGTGTTTGCAATTGGTCAAGCAGGAAACAAGTTTATCCTTGGTTCACCAGATGATGTGCTTTCTGCTAAGAAACCCATGACGATGAAAAAGATATTTGGAAGACAAAGCTTGGTTGAACTCACAGGACACAGATACAAGTTAGTGAAGGGGGAAATGCTGAAATTCTTGAAACCCGAATGCCTTCAGAAGTATGTAAAAAAGATGGATGAATTGGTGAATGCTACATTACTGAGAGAAGTGACAGAGAAAGAAACAATGGGAGTTGTGGTGTTGATGAAGAAACTGTCCTATGATTTATCATGCAATATATTGTTTGACATTAAGGATGAGCACACCAGGGAGGCTTTGTTTGAGGATTTCACTTTAGCATTTAAAGCAATTCATTCTCTTCCCATCAATTTCCCTGGTACCACATTTTGGAGAGGCCAAAGAGCCAGGGCAAGAATTGTTGACAGAATGATTCCTATTATGAGCAAAAGATGGGAGGAACTGTCTAAAGGAGTCTTAAGCTCTACCAATGACATGCTTTCTGGCTTGCTTGCACTAAGGGATGAAAATGATCAACCTCTAGCACATGATTTAATTGCAGACAATTTTATATTTTTACTTGTTGCTAGTCATGACACATCTGCCACTCTCATGAGCTTGATGATATGGAAGTTATCTAGAGATCCAGAAGTTTACAAAAAAGTTTTACAAGAACAAATGGAAATCATAAAGCAAAGGGAAGGAACAGAAGAGAGACTAACATGGGAAGAGATTCAAAAGATGAAATATACATGGAGACTGGCTCAGGAACTGATGAGGATGATCCCTCCCTTGTTTGGCAGCTTTAGGAAAGCACTTAAAGATACTAGCTTTCAAGGATATGACATACTAAAAGGGTGGCAGGTGTATTGGGCAGCATATGGAACCCATATGAAGGATGATATATTTGAGAATCCAGAGAAGTTTGATCCAGCTCGTTTTGAGAATCCGACAAAGCCAATTCCACCTTATTCTTACCTTCCATTTGGTGCAGGGATTCATTACTGCATAGGAAACGAGTTTGCCAGGATTGAGACCTTGGCAACTATTCACAACTTTGTGAAACTGTTTGAATGGTCTCAAGTAAACCCAGAGGAACCAATTACCCGTCAACCAATGCCATATCCATCCATGGGTCTCCCAATTAAGATCAAACCCAGATCTAATATGCCTTGA 1449 0.4017 MVVGISFFVLFSSTLSLAFLLSKWFSKGQTKNVPKGSLGYPIIGETLSFLKAQRQDKGSEWLEERISKYGPVFKTSLMGSTTVFAIGQAGNKFILGSPDDVLSAKKPMTMKKIFGRQSLVELTGHRYKLVKGEMLKFLKPECLQKYVKKMDELVNATLLREVTEKETMGVVVLMKKLSYDLSCNILFDIKDEHTREALFEDFTLAFKAIHSLPINFPGTTFWRGQRARARIVDRMIPIMSKRWEELSKGVLSSTNDMLSGLLALRDENDQPLAHDLIADNFIFLLVASHDTSATLMSLMIWKLSRDPEVYKKVLQEQMEIIKQREGTEERLTWEEIQKMKYTWRLAQELMRMIPPLFGSFRKALKDTSFQGYDILKGWQVYWAAYGTHMKDDIFENPEKFDPARFENPTKPIPPYSYLPFGAGIHYCIGNEFARIETLATIHNFVKLFEWSQVNPEEPITRQPMPYPSMGLPIKIKPRSNMP 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02034 482 CDD CYP90-like 65 477 - -
Vimu2g02034 482 Gene3D Cytochrome P450 25 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02034 482 SUPERFAMILY Cytochrome P450 31 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02034 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Vimu2g02034 482 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02034 482 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02034 482 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02034 482 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02034 482 PANTHER CYTOCHROME P450 26 32 467 - -
Vimu2g02034 482 FunFam Taxadiene 5-alpha hydroxylase 24 478 - -
Vimu2g02034 482 PRINTS E-class P450 group IV signature 411 427 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02034 482 PRINTS E-class P450 group IV signature 388 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02034 482 PRINTS E-class P450 group IV signature 60 83 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02034 482 PRINTS E-class P450 group IV signature 427 445 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02034 482 Pfam Cytochrome P450 34 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02034 Vimu-Chr2 15017491 15019752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02034 1 453 Cytochrome P450 AT4G19230 30.482 4.80e-65 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02034 - - gmx:100790209 832.017