Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02029 ATGCATATTTTCCATATATTTCGCAAGAGGCATTATGCTATAAATACGCACCATGGTTTGCTTATGAATCATCCACTTTTTCTCTCAAAGTACTTCACCAAAGCCAAGCTAAAAATAAGCACTTCAACTTTCAAAACCATGGCTCAAACCCCATTTCTTCTGTTGTCAAATCTTCAAAGCTTTTGGCCTTCTTTGGTTGTCATAATCACCTGCTTCACCATTATGATCAAAACCCTAAGCTCTAACTTCATTCAGACTTATTCTAAGAAACAAAAGCCAAAGCTCCCTCCTGGACCCAAACCATGGCCTATAGTTGGCAACCTTCCTGAAATGCTTGCAAGCAAACCTGCTTATAAGTGGATACATAATCTCATGAAACAAATGAACACTGATATTGCATGTATCCGCTTAGGAAATGCCTATGTCATCCCAGTCACGTCTCCCTCCATTGCTACTGAGTTCTTGAGAAAACAAGATGCTACTTTTGCATCAAGATCACTCAGCCTCTCCACTGATCTCATTACTAGTGGATATTCAACAACCATTTTTGTACCCTTTGGTGACCAGTGGAAGAAAATGAAGAAAATCATAACCCACGATTTGCTTTCTCCACAAAAGCACCTATGGCTTCACGACAAAAGAACTGAAGAGGCTGACAACCTTATGTTTGACGTCTACAACAAGTGCAAAATGGTGCATGATGGTGTTTCTGGCCTTGTCAATGTTAGGAGTGCTGCAAGGCATTATTGTGGCAACCTTATCAGAAAAATTACTTTTAATGTAAGGTATTTTGGAGATGGTAGAGAGGATGGAGGGCCCGGCTTTGAAGAAGTAGAACATGTTGATTCCATCTTTGATTTGCTCAACTACGTTTATTCCTTTTCTATTTCTGATTATATGCCATGCTTGAGGGGACTTGATTTGGATGGCCATAAGAAAAAAGTGAAGGAAGCTTTGAGGAACATTAAGAAGTATCATGACCCCATCGTTCACCAGAGAATCAAACAATGGAATGATGGTTTAAAGGTTGATGCAGAGGATTGGCTTGATGTTCTCATCTCACTCAAAGATGCCAACAATAATCCATCGTTAACATTCGAAGAGATCAGTGCACAAATCATAGAATTGATGCTTGCAACAGTGGACAATCCATCCAATGCATTTGAATGGGCACTTGCTGAGATGATTAACCAACCTGAGTTACTTCGTCGAGCTGTTGAAGAATTGGACAGTGTGGTAGGAAAAGACAGGCTGGTCCAAGAATCAGACATACCTAAGCTGAACTATGTGAAGGCATGTGCGAAAGAAGCTTTTCGTCTTCATCCCATTGCACCTTTCATTCCTCCCCATGTCTCTATGAGTGACACTGTTGTGGGGAATTACTTCATCCCTAAGGGTAGCCACGTAGTACTAAGCAGACAAGAACTTGGAAGAAATCCAAAAGTGTGGGATGAACCCTACAAGTTCAAACCTGAACGCCACCTGAAGAGTGATGCAGATGATGTGGTTTTGACTGAACCAAATCTGAAGTTCATATCATTTAGCACTGGAAGACGAGGTTGTCCTGGAGTGATGTTAGGAACGACAATGACAGTGATGCTATTTGCTAGATTGCTCCATGGCTTCACTTGGACTGCACCACCCGATGTTCCAACAGTCAACCTTTCTGAGTCAGACGATGATATCCTTCTTGCACAACCACTTCTTGCAATTGCTCAGCCAAGATTACCAGAAAACCTATACCAACTCTAA 1752 0.4132 MHIFHIFRKRHYAINTHHGLLMNHPLFLSKYFTKAKLKISTSTFKTMAQTPFLLLSNLQSFWPSLVVIITCFTIMIKTLSSNFIQTYSKKQKPKLPPGPKPWPIVGNLPEMLASKPAYKWIHNLMKQMNTDIACIRLGNAYVIPVTSPSIATEFLRKQDATFASRSLSLSTDLITSGYSTTIFVPFGDQWKKMKKIITHDLLSPQKHLWLHDKRTEEADNLMFDVYNKCKMVHDGVSGLVNVRSAARHYCGNLIRKITFNVRYFGDGREDGGPGFEEVEHVDSIFDLLNYVYSFSISDYMPCLRGLDLDGHKKKVKEALRNIKKYHDPIVHQRIKQWNDGLKVDAEDWLDVLISLKDANNNPSLTFEEISAQIIELMLATVDNPSNAFEWALAEMINQPELLRRAVEELDSVVGKDRLVQESDIPKLNYVKACAKEAFRLHPIAPFIPPHVSMSDTVVGNYFIPKGSHVVLSRQELGRNPKVWDEPYKFKPERHLKSDADDVVLTEPNLKFISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWTAPPDVPTVNLSESDDDILLAQPLLAIAQPRLPENLYQL 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02029 583 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 514 523 IPR017972 GO:0005506|GO:0016705
Vimu2g02029 583 CDD CYP79 130 576 - -
Vimu2g02029 583 SUPERFAMILY Cytochrome P450 96 575 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02029 583 Gene3D Cytochrome P450 87 578 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02029 583 PRINTS E-class P450 group I signature 368 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02029 583 PRINTS E-class P450 group I signature 249 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02029 583 PRINTS E-class P450 group I signature 511 521 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02029 583 PRINTS E-class P450 group I signature 431 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02029 583 PRINTS E-class P450 group I signature 388 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02029 583 PRINTS E-class P450 group I signature 472 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02029 583 PRINTS E-class P450 group I signature 521 544 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02029 583 PRINTS E-class P450 group I signature 150 171 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02029 583 FunFam Cytochrome P450 9 88 579 - -
Vimu2g02029 583 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 66 582 - -
Vimu2g02029 583 Pfam Cytochrome P450 96 567 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02029 Vimu-Chr2 14985931 14987819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02029 32 581 Cytochrome P450 AT4G39950 51.906 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02029 - K14984 gmx:100809902 926.776