Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02020 TTGAATCATCCACCTTTTCTCTCAAAGTACTTCACCATAGCCAAGCTAAAAATAAGCACTTCAACTTTCAAAACCATGGCTCAAACCCCATTTCTTCTGTTGTCAAATCTTCAAAGCTTTTGGCCTTCTTTGGTTGTCATAATCACCTGCTTCACCATTATGATCAAAACCCTAAGCTCTAACTTCATTCAGACTTATTCTAAGAAACAAAAGCCAAAGCTCCCTCCTGGACCCAAACCATGGCCTATAGTTGGCAACCTTCCTGAAATGCTTGCAAGCAAACCTGCTTATAAGTGGATACATAATCTCATGAAACAAATGAACACTGATATTGCATGTATCCGCTTAGGAAATGCCTATGTCATCCCAGTCACATGTCCCACCATCGCTACTGAGTTCTTGAGAAAACAAGATGCTACTTTTGCATCAAGATCACTCAGCATGTCCAGTCATCTCATTTCTAATGGATATTCAACAACAATTTTTGTGCCCTTCGGTGACCAGTGGAAGAAAATGAGGAAAATCGTAACCAACGATTTGCTTTCTCCACATAAGCACCTATGGCTTCACGACAAAAGAACAGAAGAGGCCGACAACCTTATGTTTTACGTCTACAACAAGTGCAAAATGGTGAACGATGGTACTTATGGCCTTGTCAATGTTAGGAATGCTGCAAGGCATTATTGTGGCAACCTTATCAGAAAAATTACTTTCAATGTAAGGTATTTTGGGGAGGGTAGAGAGGACGGAGGGGCCGGTTTTGAAGAAGTAGAACATGTTGATTCCATCTTCGATTTGCTCAAATACATTTATTCCTTTTCTGTTTCTGATTATATGCCATACTTGAGGAAACTTGACTTGGATGGCCAAGAGAAGAAAGTGAGGGAAGCTTTGAGGACCATTAAGAAGTATCATGATCCAATCGTTCAACAGAGAATCAAACAATGGAATGATGGCTTAAAGATTGATGAAGAGGACTGGCTTGATGTTCTCATCTCACTCAAAGATGCCAACAATAATCCATCGTTAAATTTCGAAGAGATCAGCGCACAAATCATAGAATTGATGCTTGCAACAGTGGACAATCCATCCAATGCATTTGAATGGGCACTTGCTGAGATGATTAACCAACCTGAGTTACTTCGTCGAGCTGTTGAAGAATTGGACAGTGTGGTTGGAAAAGACAGGCTGGTCCAAGAATCAGACATACCTAAGCTGAACTATGTGAAGGCATGTGCGAAAGAAGCTTTTCGTCTTCATCCCATTGCACCTTTCATTCCTCCCCATGTCTCTATGAGTGACACTGTTGTGGGGAATTACTTCATCCCTAAGGGTAGCCACGTATTGCTAAGCAGACAAGAACTTGGAAGAAACCCAAAAGTGTGGAATGAACCCTACAAGTTCAAACCGGAACGCCACCTGAAGAGTGATGCAGATGATGTGGTTTTGACTGAACCAAATCTGAAGTTCATATCATTTAGCACAGGAAGACGAGGTTGTCCCGGAGTGATGTTAGGAACGACAATGACAGTGATGCTATTTGCTAGATTGCTCCATGGCTTCACTTGGACTGCACCACCCGATGTTCCAACAATCAACCTTTCTGAGTCGGACGATGATATCCTTCTTGCACAACCACTTCTTGCAATTGCTCAGCCAAGATTACCACAAAACCTATGCCAAATCTAA 1689 0.4174 MNHPPFLSKYFTIAKLKISTSTFKTMAQTPFLLLSNLQSFWPSLVVIITCFTIMIKTLSSNFIQTYSKKQKPKLPPGPKPWPIVGNLPEMLASKPAYKWIHNLMKQMNTDIACIRLGNAYVIPVTCPTIATEFLRKQDATFASRSLSMSSHLISNGYSTTIFVPFGDQWKKMRKIVTNDLLSPHKHLWLHDKRTEEADNLMFYVYNKCKMVNDGTYGLVNVRNAARHYCGNLIRKITFNVRYFGEGREDGGAGFEEVEHVDSIFDLLKYIYSFSVSDYMPYLRKLDLDGQEKKVREALRTIKKYHDPIVQQRIKQWNDGLKIDEEDWLDVLISLKDANNNPSLNFEEISAQIIELMLATVDNPSNAFEWALAEMINQPELLRRAVEELDSVVGKDRLVQESDIPKLNYVKACAKEAFRLHPIAPFIPPHVSMSDTVVGNYFIPKGSHVLLSRQELGRNPKVWNEPYKFKPERHLKSDADDVVLTEPNLKFISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWTAPPDVPTINLSESDDDILLAQPLLAIAQPRLPQNLCQI 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02020 562 Gene3D Cytochrome P450 66 557 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02020 562 Pfam Cytochrome P450 75 546 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02020 562 PRINTS E-class P450 group I signature 451 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02020 562 PRINTS E-class P450 group I signature 500 523 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02020 562 PRINTS E-class P450 group I signature 228 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02020 562 PRINTS E-class P450 group I signature 347 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02020 562 PRINTS E-class P450 group I signature 367 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02020 562 PRINTS E-class P450 group I signature 129 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02020 562 PRINTS E-class P450 group I signature 410 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02020 562 PRINTS E-class P450 group I signature 490 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02020 562 FunFam Cytochrome P450 9 67 558 - -
Vimu2g02020 562 CDD CYP79 109 555 - -
Vimu2g02020 562 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 45 561 - -
Vimu2g02020 562 SUPERFAMILY Cytochrome P450 75 554 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02020 562 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 493 502 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02020 Vimu-Chr2 14929491 14931321 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02020 11 559 Cytochrome P450 AT4G39950 52.000 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02020 - K14984 gmx:100809902 919.072