Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02017 ATGGCTCAAACCCCATTTCTTCTGTTGTCAAATCTTCAAAGCTTTTGGCCTTCTTTGGTTGTCATAATCACCTGCTTCACCATTATGATCAAAACCCTAAGCTCTAACTTCATTCAGACTTATTCTAAGAAACAAAAGCCAAAGCTCCCTCCTGGACCCAAACCATGGCCTATAGTTGGCAACCTTCCTGAAATGCTTGCAAGCAAACCTGCTTATAAGTGGATACATAATCTCATGAAACAAATGAACACTGATATTGCATGTATCCGCTTAGGAAATGCCTATGTCATCCCAGTCACATGTCCCACCATCGCTACTGAGTTCTTGAGAAAACAAGATGCTACTTTTGCATCAAGATCACTCAGCATGTCCAGTCATCTCATTTCTAATGGATATTCAACAACAATTTTTGTGCCCTTCGGTGACCAGTGGAAGAAAATGAGGAAAATCGTAACCAACGATTTGCTTTCTCCACATAAGCACCTATGGCTTCACGACAAAAGAACAGAAGAGGCCGACAACCTTATGTTTTACGTCTACAACAAGTGCAAAATGGTGAACGATGGTACTTATGGCCTTGTCAATGTTAGGAATGCTGCAAGGCATTATTGTGGCAACCTTATCAGAAAAATTACTTTCAATGTAAGGTATTTTGGGGAGGGTAGAGAGGACGGAGGGGCCGGTTTTGAAGAAGTAGAACATGTTGATTCCATCTTCGATTTGCTCAAATACATTTATTCCTTTTCTGTTTCTGATTATATGCCATACTTGAGGAAACTTGACTTGGATGGCCAAGAGAAGAAAGTGAGGGAAGCTTTGAGGACCATTAAGAAGTATCATGATCCAATCGTTCAACAGAGAATCAAACAATGGAATGATGGCTTAAAGGTTGATGAAGAGGACTGGCTTGATGTTCTCATCTCTCTGAAAGATTCCAACAATAACCCATTGTTAACATTCGAAGTGATCAGTGCACAAATCATAGAATTGATGGTTGCAACAGTGGACAATCCATCCAATGCATTTGAATGGGCACTTGCTGAGATGATTAACCAGCCTGAGTTGCTGCGTCGAGCTGTTGAAGAATTGGACAGTGTGGTAGGAAAAGACAGGCTGGTCCAAGAATCAGACATACCTAATCTAAACTATGTGAAGGCATGTGCGAAAGAAGCTTTTCGTCTTCATCCCATTGCACCTTTCATTCCTCCCCATGTCTCTATGAGTGACACTGTTGTGGGGAATTACTTCATCCCTAAGGGTAGCCACGTATTGCTAAGCAGACAAGAACTTGGAAGAAACCCAAAAGTGTGGAATGAACCCTACAAGTTCAAACCTGAACGCCACCTGAAGAGTGATGCAGATGATGTGGTTTTGACTGAACCAAATCTGAAGTTCATATCATTTAGCACAGGAAGACGAGGTTGTCCCGGAGTGATGTTAGGAACGACAATGACAGTGATGCTATTTGCTAGATTGCTCCATGGCTTCACTTGGACTGCACCACCCGATGTTCCGACAATCAATCTTTCTGAGTCAGAGGATGATATCCTTCTTGCACATCCACTCGTAGCAATTGCTCAGCCAAGGTTACCACCAAAGCTATACCAACTCTAA 1614 0.4213 MAQTPFLLLSNLQSFWPSLVVIITCFTIMIKTLSSNFIQTYSKKQKPKLPPGPKPWPIVGNLPEMLASKPAYKWIHNLMKQMNTDIACIRLGNAYVIPVTCPTIATEFLRKQDATFASRSLSMSSHLISNGYSTTIFVPFGDQWKKMRKIVTNDLLSPHKHLWLHDKRTEEADNLMFYVYNKCKMVNDGTYGLVNVRNAARHYCGNLIRKITFNVRYFGEGREDGGAGFEEVEHVDSIFDLLKYIYSFSVSDYMPYLRKLDLDGQEKKVREALRTIKKYHDPIVQQRIKQWNDGLKVDEEDWLDVLISLKDSNNNPLLTFEVISAQIIELMVATVDNPSNAFEWALAEMINQPELLRRAVEELDSVVGKDRLVQESDIPNLNYVKACAKEAFRLHPIAPFIPPHVSMSDTVVGNYFIPKGSHVLLSRQELGRNPKVWNEPYKFKPERHLKSDADDVVLTEPNLKFISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWTAPPDVPTINLSESEDDILLAHPLVAIAQPRLPPKLYQL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02017 537 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02017 537 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02017 537 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02017 537 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02017 537 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02017 537 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02017 537 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02017 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Vimu2g02017 537 Gene3D Cytochrome P450 41 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02017 537 SUPERFAMILY Cytochrome P450 50 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02017 537 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 20 536 - -
Vimu2g02017 537 FunFam Cytochrome P450 9 42 533 - -
Vimu2g02017 537 CDD CYP79 84 530 - -
Vimu2g02017 537 Pfam Cytochrome P450 50 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02017 Vimu-Chr2 14872790 14874691 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02017 8 535 Cytochrome P450 AT4G39950 53.686 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02017 - K14984 gmx:100809902 933.324