Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02008 ATGGCGGACGAAGATGAAAGCCTTCGAAAGCATTCAATGTCAACCTTCAATACTTCAATGGTGGACGGAGATGAAGAAACATGTCTTCGATGGCGTGGCCAGAGTTCAGAATCGTGGAGGAGAGTTTGGGTTTCTATATCTATGGATTTCGCCCCTTTGCACCTTCAATGGCTTCTCATTTCTTTATTTGTTGTGATATGTGGTTTTACCATCATCAGAGTCTTCAGATATCACATTATTCAGAAGCCTAAACTGCCTCCAGTCCCTAAACCCTGGCCTATACTTGGTAACCTTCCTCAAATGCTTTCAAACAAACCTGTATTTCGATGGATACACGATCTCATGCAAGATATGAACACTCAAATTGCATGCATTCGTCTAGGAAATGTCCATGTAATCCCAGTCACATGTCCCTCCATTGCTTGTGAGTTTTTGAGAAAGCACGATGCTGAGTTTGCTTCAAGACCACTGACCATGGCCACTGATATCATGTCCAGTGGTTATAAGACCATAGCTATTGTACCCTTTGGGGAACAATGGAAGAAAATGAGGAGAATCTTCGTCAATGACTTGTTCTCCCCTCTCAGACACCACTGCTTTCAACACAAAAGGAACGAAGAAGCTGATAACATTATGTTTTATGTCTACAACAAATCCAACAATGTCAACGATGGGGGCCTTATCAATATCAGAGATGTTTCACAGCACTATTGCTGCAATGTGACAAGGAAGTTGATTTTTAATACAAGGTACTTTGGAAAGGGTAGGGTGGATGGAGGGCCAGGGCCAGAAGAAGTTGAACAAGTGAATGACATTTTCACATTGCTTAAACACGTTTATGCATTTTCTGCTTCTGATTATCTGCCATGGTTGAGTGTTTTTGATCTGGATGGGCACAAGAGGAAGGTGAAGAAAGCAATGAGAACGATGGAGAAGTATCATGGTCCAATGGTTGAAGAGAGAATGAAGCAATGGAAGAATGGAGCAAAGAGCGTTGAAGAAGACTTGTTGGATGTTCTGATCTCACTCAAAGATGACAATGACAATCCTACTCTGACAATGATGGAAATCAAGGCGCTTACTATAGTAATACATCACTCCTTATCACCTTTTTTCGAAGTGCCAGTTTTTTAA 1134 0.4145 MADEDESLRKHSMSTFNTSMVDGDEETCLRWRGQSSESWRRVWVSISMDFAPLHLQWLLISLFVVICGFTIIRVFRYHIIQKPKLPPVPKPWPILGNLPQMLSNKPVFRWIHDLMQDMNTQIACIRLGNVHVIPVTCPSIACEFLRKHDAEFASRPLTMATDIMSSGYKTIAIVPFGEQWKKMRRIFVNDLFSPLRHHCFQHKRNEEADNIMFYVYNKSNNVNDGGLINIRDVSQHYCCNVTRKLIFNTRYFGKGRVDGGPGPEEVEQVNDIFTLLKHVYAFSASDYLPWLSVFDLDGHKRKVKKAMRTMEKYHGPMVEERMKQWKNGAKSVEEDLLDVLISLKDDNDNPTLTMMEIKALTIVIHHSLSPFFEVPVF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02008 377 Gene3D Cytochrome P450 80 365 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02008 377 SUPERFAMILY Cytochrome P450 79 363 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g02008 377 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 59 362 - -
Vimu2g02008 377 Pfam Cytochrome P450 86 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02008 Vimu-Chr2 14775696 14777249 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g02008 85 359 Cytochrome P450 AT5G05260 52.688 1.24e-99 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02008 - K12153 vra:106774791 609.372