Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01974 ATGAATTTAAAAGAACTGGACCCCAAATACCATGCCCAACAACACCTACTCACCGAGCTGTCTAGCATGCATCCCAAAACATCAGACCTTCATGCATTGGTCTTCAAATTTTCACCGAACACCGTCTCAGATTTTATTATTTACATCTTTGAAAAAAGGAAAATGTCTGCTGAGAAGAGAAGGTGTTCTCTAACCATGCAGCTTCGATTTGATTCTCAGTTTTTTATGTCTGTTGTGTTTCTTTCTTTTGTTGGGTTGTTATGTTTTTTGTACACTTCTTTTGTGGAGAAGCCAAATAGGCTTCGTTCTAAGCTGATGAAGCAAGGTATCAGTGGCCCACCTTCAACTATTCTGCTTGGCAATATTTTGGAGTTACAGAAAGCTCGCTCTGCCACTTCAAAGTCGTCTTCTTCTTCTCAAGTCCCTTCCTCTCACAACTGTGCTGCTCTTCTCCTTCCACTCTTTGATAAATGGAGAAACGAATATGGTCAAGTGTTCATGTTTTCTCTTGGAACCATTCAAATATTGTGTGTGAACCAACCAGACATAGTGAGAGAGGTCACTGTCTGCACATCCTTGGACTTGGGTAAGCCTGTATATCAACTGAAACAACTAGGGCCTTTGGTGGGTCGAGGCATTTTAACTTCCAATGGGACTAAATGGGTTCATCAAAGAAAGATCATAGCTCCAGAACTATACATGGAAAAAGTTAAGGGAATGATGAATATAATTAGCGAGTCTGCTGCATCTGTGGTAAACTTGTGGAGTAATAGAATAGAAGCAGAAGGTGGAGTTGCTGACATCAAAATTGATGAGTGCATGAGAAACTTCTCTGGGAATGTTATTTCAAGAGCATGCTTTGGAAGCAATTATACCAAGAGTGAAGAGATTTTCTTGAGATTCGTAGCTCTCCAAGAGTTATTGTCCTGGAAAAATATGTCAAGATTTATCCCTGGCATGAGCTACCTTCCAACAAAGACCAATAGAGAAATATCGACATTAGAAAAGGAGGTGAAAGAAATGATACTCCAGGTGGTGAAGGAAAGAAGGGAAACTACTTTTGAGAAGGACTTGCTGCAAATAATTCTTGAAAATGTTAAGGACAGTGAGCTAAGTAAAGAGGCCATTGACGATTTCATCGTTGATAACTGCAAGAATATATACTTGGCAGGCTATGAGACAACTGCAGTTTCTGCTACATGGTGCCTGATGCTGCTGGCCGCAAACCCAGATTGGCAAGATCGTGTTCGTGCTGAGGTGACAGAAATTTGCAGGAGTGGAATCCCAGATTTTAGTATGCTTGGTAAGATGAAGCAGCTAGGAATGGTTATTAATGAAACATTGCGGCTTTATCCACCTGTGACTGCGGTGTCAAGAGAGGCCTTGAAGGACATGAAATTTGGGAACCTTGATGTTCCAAAGGGGTTTAACCTTTGGATAATGGTAGTAAGTTTGCACACAAATCCTGATATATGGGGAGATGATGCCTACAAATTCAACCCAGAAAGATTTGCCAATGGAACCACAGGCTGTTGTAAGTTGCCACACGTGTACATGCCCTTTGGGGTTGGTCCACGAGTGTGTCTTGGACAGAACTTAGCTATTGTGGAACTCAAGATGATCATAGCTCTCATATTGTCCAAATTCACTTTCTCACTCTCTCCACATTACGTTCATTCGCCCACTCTCAGGTTGCTCATAGAGCCTCAGCATGGAGTCAATATCTTGGTCAAAAAACTATGA 1743 0.4142 MNLKELDPKYHAQQHLLTELSSMHPKTSDLHALVFKFSPNTVSDFIIYIFEKRKMSAEKRRCSLTMQLRFDSQFFMSVVFLSFVGLLCFLYTSFVEKPNRLRSKLMKQGISGPPSTILLGNILELQKARSATSKSSSSSQVPSSHNCAALLLPLFDKWRNEYGQVFMFSLGTIQILCVNQPDIVREVTVCTSLDLGKPVYQLKQLGPLVGRGILTSNGTKWVHQRKIIAPELYMEKVKGMMNIISESAASVVNLWSNRIEAEGGVADIKIDECMRNFSGNVISRACFGSNYTKSEEIFLRFVALQELLSWKNMSRFIPGMSYLPTKTNREISTLEKEVKEMILQVVKERRETTFEKDLLQIILENVKDSELSKEAIDDFIVDNCKNIYLAGYETTAVSATWCLMLLAANPDWQDRVRAEVTEICRSGIPDFSMLGKMKQLGMVINETLRLYPPVTAVSREALKDMKFGNLDVPKGFNLWIMVVSLHTNPDIWGDDAYKFNPERFANGTTGCCKLPHVYMPFGVGPRVCLGQNLAIVELKMIIALILSKFTFSLSPHYVHSPTLRLLIEPQHGVNILVKKL 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01974 580 PRINTS E-class P450 group I signature 518 528 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01974 580 PRINTS E-class P450 group I signature 399 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01974 580 PRINTS E-class P450 group I signature 528 551 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01974 580 PRINTS E-class P450 group I signature 277 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01974 580 PRINTS E-class P450 group I signature 379 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01974 580 PRINTS E-class P450 group I signature 159 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01974 580 Pfam Cytochrome P450 155 556 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01974 580 Gene3D Cytochrome P450 98 580 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01974 580 PANTHER CYTOCHROME P450 FAMILY MEMBER 96 572 - -
Vimu2g01974 580 SUPERFAMILY Cytochrome P450 149 578 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01974 580 Coils Coil 331 351 - -
Vimu2g01974 580 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 521 530 IPR017972 GO:0005506|GO:0016705
Vimu2g01974 580 PRINTS P450 superfamily signature 528 539 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01974 580 PRINTS P450 superfamily signature 390 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01974 580 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01974 580 PRINTS P450 superfamily signature 519 528 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01974 Vimu-Chr2 14397309 14400008 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01974 183 577 Cytochrome P450 AT5G24900 43.980 1.46e-124 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01974 K24544 - gmx:100785420 822.387