Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01973 ATGCAACTTCAATTTGATTCTCAGATTTTCATGTCTATTGTGTTTCTATGTTTTGTTGGGTTGTTATGTTATTTGTACACTTCTTTTGTGGAGAAGCCAAATAGGCTTCGTTCTAAGCTAATGAAGCAAGGTATAAGTGGCTCACCTCCAACTATTCTGCTTGGCAATATTTTGGAGTTATATAAAGCTAGCTCTGCCACTTCAAAGTCTTCTTCTTCTTCTCAAGTCCCTTCCTCTCACAACTGTGCTGCTCTTCTCTTTCCACTCTTTGATAAATGGAGAAACGAATATGGTCAAGTGTTCATGTTTTCTCTTGGAACCATTCAAATATTGTGTGTGAACCAACCAGACATAGTGAGAGAGGTCACTGTCTGCACATCCTTGGACTTGGGTAAGCCTGTATATCAACTGAAACAACTAGGGCCTTTGGTGGGTCGAGGCATTTTAACTTCCAATGGGACTAAATGGGTTCATCAAAGAAAGATCATAGCTCCAGAACTATACATGGAAAAAGTTAAGGGAATGATGAATATAATTAGCGCGTCTGCTGCATCTGTGGTAAACTTGTGGAGTAATAGAATAGAAGCAGAAGGTGGAGTTGCTGACATCAAAATTGATGAGTGCATGAGAAACTTCTCTGGGAATGTTATTTCAAGAGCATGCTTTGGAAGCAATTATACCAAGAGTGAAGAGATTTTCTTGAGATTCGTAGCTCTCCAAGAGTTATTGTCCTGGAAAAATATGTCAAGATTTATCCCTGGCATGAGCTACCTTCCAACAAAGACCAATAGAGAAATATCGACATTAGAAAAGGAGGTGAAAGAAATGATACTCCAGGTGGTGAAGGAAAGAAGGGAAACTACTTTTGAGAAGGACTTGCTGCAAATAATTCTTGAAAATGTTAAGGACAGTGAGCTAAGTAAAGAGGCCATTGACGATTTCATCGTTGATAACTGCAAGAATATATACTTGGCAGGCTATGAGACAACTGCAGTTTCTGCTACATGGTGCCTGATGCTGCTGGCCGCAAACCCAAACTGGCAAGATCGTGTTCGTGCTGAGGTGACAGAAATTTGCAGGGGTAGAATCCCAGATTTTAGTATGCTTGGTAAGATGAAGCAGTTAGGAATGGTTATTAATGAAGCATTGCGGCTTTATCCTCCTGTGACTGTGATGTCAAGAGAGGCCTTGGAGGACATGAAATTTGGGAACCTTGATGCTCCTAAGGGGATTAATATTTGGGTATTGGTATTGAGTATGCATACAAATCCAGATATATGGGGAGATGATGCCTACAAATTCAACCCAGAAAGATTTGCCAATGGAACCACAGGCTGTTGTAAGTTTCCACACGTGTACATGCCCTTTGGGGTTGGTCCACGAGTGTGTCTTGGACAGAACTTAGCTATTGTGGAACTTAAGATGATCATAGCTCTCATATTGTCCAAATTCACTTTCTCAATCTCTCCACGTTACGTTCATTCGCCCACTCTCAGGTTGCTCATAGAGCCTGAGCATGGAGTCAATATCTTGGTCAAAAAACTATGA 1548 0.4083 MQLQFDSQIFMSIVFLCFVGLLCYLYTSFVEKPNRLRSKLMKQGISGSPPTILLGNILELYKASSATSKSSSSSQVPSSHNCAALLFPLFDKWRNEYGQVFMFSLGTIQILCVNQPDIVREVTVCTSLDLGKPVYQLKQLGPLVGRGILTSNGTKWVHQRKIIAPELYMEKVKGMMNIISASAASVVNLWSNRIEAEGGVADIKIDECMRNFSGNVISRACFGSNYTKSEEIFLRFVALQELLSWKNMSRFIPGMSYLPTKTNREISTLEKEVKEMILQVVKERRETTFEKDLLQIILENVKDSELSKEAIDDFIVDNCKNIYLAGYETTAVSATWCLMLLAANPNWQDRVRAEVTEICRGRIPDFSMLGKMKQLGMVINEALRLYPPVTVMSREALEDMKFGNLDAPKGINIWVLVLSMHTNPDIWGDDAYKFNPERFANGTTGCCKFPHVYMPFGVGPRVCLGQNLAIVELKMIIALILSKFTFSISPRYVHSPTLRLLIEPEHGVNILVKKL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01973 515 Coils Coil 266 286 - -
Vimu2g01973 515 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01973 515 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01973 515 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01973 515 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01973 515 SUPERFAMILY Cytochrome P450 85 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01973 515 Gene3D Cytochrome P450 32 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01973 515 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01973 515 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01973 515 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01973 515 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01973 515 PRINTS E-class P450 group I signature 212 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01973 515 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01973 515 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01973 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Vimu2g01973 515 Pfam Cytochrome P450 89 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01973 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 31 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01973 Vimu-Chr2 14375099 14377244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01973 118 512 Cytochrome P450 AT5G24900 42.260 2.76e-122 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01973 K24544 - gmx:100785420 811.986