Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01944 ATGTCAAACCGAGTTTGCATAAAAAGAGGGTTGTTGACACTGATGGGTGTTAAGTTTATGGGCAGACTGGAACACCCAACTCGTTTTTCCATGTATGTTCGATCCAAAACAACGTCTGCTCAGTATGTAGCATCGAGATTTCGAGACCCCACGTTTGAGAAACTCATGGACAACTACAAGAACCTTGTTAAGGTCATTTCCATTCAAGACCTCATCCTTGCAAACCCAAAGAACCCATCAGTCTCCATTGATTTCCTCTCCAAGCTCTCCCAGAAGCTCCACTTAAACCGCGGGGCCACTGCCTTCCTCTGCAAGTTTCCTCACATCTTCCACATTCACTATGACCATTCCAAGTTGAAGCCCTTTTGCAGGTTAACTGACGCTGCTCTTGGTGTTACACGGCAGGAAGCGGTGGCCATCAATGCTTCTTTGCCTGTTGTTGTTGAAAGACTTGTCCGGATACTCTCCATGTCAGCATCCAGAATGGTGCCTCTTAGAGCTGTTTTTAAGGTTTGGAAGGAGCTTGGGCTGCCTGATGATTTCGAGGACTCTGTTATATCTGCTAATTCTGGTGTTTTCCAGCTGTGTGATGGGCATGAACAGAATACTCATTTGTTGAAGCTGGTTGATGGTGTTTCCAGCAATGGCATTAGGGCGGCTGTTGAGGATTGGAGGGTTGTTGAGTGCTGCAAGGAAGACTGCAGTGTTGATAGGATGGAAATGCAGTTTAGTTTCAAACACGGGTATCCTCCGGGGATGAGGTTAAGCAAGAATTTCAAGGCCAAGGTGAAGGAGTGGCAGAGGTTGCCATATGTGGGGCCTTATGAAGTGCCGCGTGAGAAGAAGTCTAAGGCTGGAATGATGGCCATGGAGAAGCGAGCAGTATCGATTGTTCATGAGTTCCTGAGTTTGACAGTAGAGAAAATGGTGGAAGTTGAGAAGATCAGCCAGTTTCGGAAATGGTTTCGGATTGATTTAAATATAAGGGATCTCTTCTTGGACCACCCAGGGATCTTTTATTTGTCAACTAAGGGTAAAAGACATACTGTTTTCCTGAGGGAAGCTTATGAACGAGGGTGTTTGATAGAACCAAATCCTGTCTATGATGCAAGAAGACGGCTACTTGATCTTGTTGTTTTAGGACGTCGGGGTCTGCCAGCTGTTAATTCGAAGTTGGAGGATTCAAGCAGCTGCGACGAGGCTAGACAAGAGGAAAACCAACAAAGACATGATTTGTCACCATCTTGA 1248 0.4583 MSNRVCIKRGLLTLMGVKFMGRLEHPTRFSMYVRSKTTSAQYVASRFRDPTFEKLMDNYKNLVKVISIQDLILANPKNPSVSIDFLSKLSQKLHLNRGATAFLCKFPHIFHIHYDHSKLKPFCRLTDAALGVTRQEAVAINASLPVVVERLVRILSMSASRMVPLRAVFKVWKELGLPDDFEDSVISANSGVFQLCDGHEQNTHLLKLVDGVSSNGIRAAVEDWRVVECCKEDCSVDRMEMQFSFKHGYPPGMRLSKNFKAKVKEWQRLPYVGPYEVPREKKSKAGMMAMEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWFRIDLNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIEPNPVYDARRRLLDLVVLGRRGLPAVNSKLEDSSSCDEARQEENQQRHDLSPS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01944 415 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 34 400 IPR045040 GO:0003723
Vimu2g01944 415 Pfam Plant organelle RNA recognition domain 48 382 IPR021099 GO:0003723
Vimu2g01944 415 MobiDBLite consensus disorder prediction 390 415 - -
Vimu2g01944 415 MobiDBLite consensus disorder prediction 395 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01944 Vimu-Chr2 14143164 14146958 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01944 2 14143164 14146958 Vimu2g01944 2 14143164 14146958 ECH
Vimu2g01944 2 14143164 14146958 Vimu3g02052 3 35423434 35425024 PCT