Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01932 ATGCAACAAAACAATTACGACAATAATTCATATGTAAAAGAGTTTGGCATCAGCATAGATAACAAGCTTGCATCTGTTGAGGCTCGGGTTCTTCCACCTCGTTGGTTGAAATATCACGCCACTAGAAGAGAAAAAGAATACTTGCCACAAGTTGTTAATGCAGAAAGTAATAAATGGAAGTACTGTAAGATATTGGGCATGTATCAATTTCTCTCAAAGTGTACAAGAAAGTACACCTCGTGGATTTTGTCAACAGTTAGTTCAAATGTGCCAAATACCAAGCATGGAATTCAGTCAGGACCCTGTGATTCCTATATATTCTGCAAGACCAGATCAGGTAAAGAAGGCTTTGATTATGTACACTCTGTTGCTATGGATAAGCTTTGTGGGAAAGAACTAGAGTTACTGTTGTCATTCTTGCAGACAATAATGGCTCTCTGTACAATATGA 450 0.3778 MQQNNYDNNSYVKEFGISIDNKLASVEARVLPPRWLKYHATRREKEYLPQVVNAESNKWKYCKILGMYQFLSKCTRKYTSWILSTVSSNVPNTKHGIQSGPCDSYIFCKTRSGKEGFDYVHSVAMDKLCGKELELLLSFLQTIMALCTI 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01932 149 Pfam Argonaute linker 2 domain 1 38 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01932 Vimu-Chr2 14088944 14089705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01932 1 140 Eukaryotic Initiation Factors Gene Family AT5G43810 35.811 1.06e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01932 K11593 - gmx:100810235 105.531