Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu2g01922 | ATGGCGGAAGTGAAGCTTGTAGGATTGAGCTTGTTGTGGTTGTGGTCATGGTGGAGCTTAGAGGGCGTAAAAGGAGACCCTCAACTCTTTCTACTAAAATGGGATTGCAGCGGATTCATTGCACCCAACTTATCCAACTTCAACAAAAACCTTAATGCAACTTTTGCAGATCTACGAGATCAGCTCAGCAACCAAAGGAACCACTTTGCCACTGCACAAGCAACCACCGGATCGGATCCTGTCTATGCTATGTTTCAGTGCAGAAACTACCTCTCCGATACTGACTGCGCCACCTGCTTCGCCGCCGCCGTCACCCAAATTCGCAACTGCTCCGCCGGAGTCAACGGTGCCCGTGTCGTTTATGACGGTTGCTTCCTCAGGTACGAGAGCAACGACTTCTTCGACCAGATCTTTTCTCGCAGCAGCATACTGTGTGGAAATCAGACTGCGGATGGAAGCACTGATTTTGGCGCAGTTGGAGAACAAGTGCTGATAGATCTACGAATAGGAACACCCAAAATCAGAGGCTACTCTGCAGCCACCAAAACAAAAGTGGCTGGTGGTGCAATCTATGCCTTTGCACAATGTGCTGAAACTCTCTCACAAGACACTTGTTTGGATTGTTTGTCAATTGAAGAGAGCAGCGTACAAGGTTGTCTTCCCAGTACTGAAGGTAGAGCATTCGACCCTGGCTGCTTTATGAGATACTCAGAGACACCCTTCTTTGCTGATAACCAAACCATTGACATCACTCCCTTCTTAAAACAAGGAGGAGGAGGTTCAAGAAAAAAGTGGATTCTTATTGGTGGTTGTGTTGGAGGTGCACTTCTTGTTGTGATCCTTATTTCATTATTTCCCTGGCATAAGAGATCTCAGAGTCCCAAGAGAGTTCCCACAAGTAACGTAGTGGGAGCATCTGAGTTGAAAGGTGCAACCAAGTTCAAGTACAGTGAACTGAAAGCTGCAACAAGAAATTTTAGCGAGAAAAACATACTAGGAGAAGGAGGCTTTGGCGCTGTATACAAGGGGACAATGAAGAATGGAAAAGTTGTTGCGGTAAAAAAATTATTTTCAGGAAATTCCAGCGAGATAGATGACAATTTTGAAAGTGAAGTAACGCTTGTAAGTAATGTTCATCACAGAAATCTGGTTCGGCTTCTCGGTTGCTGCAGTAAAGGCCAAGAAAAAATCCTTGTTTATGAATACATGGCAAACAACAGTCTTGACAAATTCTTATTTGGTAACAGAAAAGGTTCACTCAACTGGAAACAACGCTATGAAATAATTTTGGGCACAGCAAGGGGATTGGCCTATCTACATGAAGAATTTTATGTGTCTATCATACATAGAGATATTAAGAGTGGCAATGTCCTCTTGGATGAACAGCTTCAACCCAAAATTTCTGATTTTGGTTTGGTGAAGCTCCTACCAGGGGACCAATCCCATCTCAGAACAAAAGTTGCAGGAACACTGGGATACACAGCACCAGAGTATGTACTCCATGGTCAGTTATCAAAAAAGGCTGATACATACAGCTATGGAATTGTGGTACTTGAAATCATAAGTGGTCAAAGGTGTACTGATGTGAAGAGTGTTGATGGTAGCCATGAATACCTTCTTCGACGAGCATGGGACTTGTATGAGAAAGGCATGGAGTTGGAGTTGGTGGACAAAAGCTTAGGCCCTAATAGCTATGATATAGAAGAAGTGAAAAAAGTTATAGGCATTGCTTTGTTGTGCACTCAACCATCGGCTGGTATGAGACCGGCTATGTCTGAAGTAGTGGTGCTGCTCAGCAGTAATGACTTTCTTGTGCATATGAGACCTTCAATGCCTATCTTTATTGAATCGAATGGAAGACCCCCAAGAGATATCTCTGCCTCGACTGCTTCCTCTGTGTCTAATGCCAGTGCTTCCCATTCTATAGTACCTGCTAGATGA | 1941 | 0.4405 | MAEVKLVGLSLLWLWSWWSLEGVKGDPQLFLLKWDCSGFIAPNLSNFNKNLNATFADLRDQLSNQRNHFATAQATTGSDPVYAMFQCRNYLSDTDCATCFAAAVTQIRNCSAGVNGARVVYDGCFLRYESNDFFDQIFSRSSILCGNQTADGSTDFGAVGEQVLIDLRIGTPKIRGYSAATKTKVAGGAIYAFAQCAETLSQDTCLDCLSIEESSVQGCLPSTEGRAFDPGCFMRYSETPFFADNQTIDITPFLKQGGGGSRKKWILIGGCVGGALLVVILISLFPWHKRSQSPKRVPTSNVVGASELKGATKFKYSELKAATRNFSEKNILGEGGFGAVYKGTMKNGKVVAVKKLFSGNSSEIDDNFESEVTLVSNVHHRNLVRLLGCCSKGQEKILVYEYMANNSLDKFLFGNRKGSLNWKQRYEIILGTARGLAYLHEEFYVSIIHRDIKSGNVLLDEQLQPKISDFGLVKLLPGDQSHLRTKVAGTLGYTAPEYVLHGQLSKKADTYSYGIVVLEIISGQRCTDVKSVDGSHEYLLRRAWDLYEKGMELELVDKSLGPNSYDIEEVKKVIGIALLCTQPSAGMRPAMSEVVVLLSSNDFLVHMRPSMPIFIESNGRPPRDISASTASSVSNASASHSIVPAR | 646 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu2g01922 | 646 | CDD | STKc_IRAK | 332 | 595 | - | - | |
Vimu2g01922 | 646 | Coils | Coil | 48 | 68 | - | - | |
Vimu2g01922 | 646 | ProSiteProfiles | Gnk2-homologous domain profile. | 138 | 241 | IPR002902 | - | |
Vimu2g01922 | 646 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 140 | 241 | - | - | |
Vimu2g01922 | 646 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 28 | 133 | - | - | |
Vimu2g01922 | 646 | Pfam | Protein kinase domain | 327 | 535 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu2g01922 | 646 | Gene3D | Transferase(Phosphotransferase) domain 1 | 403 | 606 | - | - | |
Vimu2g01922 | 646 | Pfam | Salt stress response/antifungal | 42 | 130 | IPR002902 | - | |
Vimu2g01922 | 646 | Pfam | Salt stress response/antifungal | 154 | 238 | IPR002902 | - | |
Vimu2g01922 | 646 | ProSiteProfiles | Gnk2-homologous domain profile. | 29 | 133 | IPR002902 | - | |
Vimu2g01922 | 646 | Gene3D | Phosphorylase Kinase; domain 1 | 288 | 402 | - | - | |
Vimu2g01922 | 646 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 447 | 459 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu2g01922 | 646 | Gene3D | - | 31 | 133 | IPR038408 | - | |
Vimu2g01922 | 646 | Gene3D | - | 139 | 241 | IPR038408 | - | |
Vimu2g01922 | 646 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 290 | 402 | - | - | |
Vimu2g01922 | 646 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 82 | 623 | - | - | |
Vimu2g01922 | 646 | ProSitePatterns | Protein kinases ATP-binding region signature. | 332 | 355 | IPR017441 | GO:0005524 | |
Vimu2g01922 | 646 | SMART | serkin_6 | 326 | 604 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu2g01922 | 646 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 403 | 606 | - | - | |
Vimu2g01922 | 646 | MobiDBLite | consensus disorder prediction | 624 | 646 | - | - | |
Vimu2g01922 | 646 | SUPERFAMILY | Protein kinase-like (PK-like) | 308 | 598 | IPR011009 | - | |
Vimu2g01922 | 646 | ProSiteProfiles | Protein kinase domain profile. | 326 | 604 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu2g01922 | Vimu-Chr2 | 14036559 | 14039697 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu2g01922 | 9 | 641 | Receptor kinase-like Gene Family | AT1G70520 | 38.331 | 3.92e-128 | 390 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vimu2g01922 | Pkinase | 6.3e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu2g01922 | - | - | var:108341533 | 1048.11 |