Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu2g01921 | ATGTTAGGACTACTGAAGCTATTGGCCTTAACTTTGATATGGTGGAGCAGTAGTGTTGTTGAACATGCAGATGCAGCAACACTGAAAACACGTCTAATAAACACTGGGTGCAGCCCATTCAACGCTTCCAACGCGCGCAGCTTCTTAGCAAATGTCAATGATTCATTGTCAGAGATGAGAGCAGAAATTAGCAACCAAAGCAAACTCTTTGGCACATCACAGAAATCAAGGTCAGGGACCCTCACATATACAATGTTTCAATGCAGAAACTATCTCTCCAAAAATGATTGTCTGTCTTGCTTCGACACTGCCTCCACCCAAATCCGCAACTGCTCCAAAGCCAATGGCGCCAGAGTTATCTACAACGATTGCTTCCTCAGGTTCTACCAACAGACCAATGAACTTGGCAGTGGGGTAACGTGTGGGAACACCAGTTTAAAAACCACTCGTGATTTTAAAGTACTTGGACAACAAGCACTCACGGATATTCAAACAGCAACACCTAAAACTAAAGGGTTTTATGCAGCTACCAAGACACAGGTGGATGATGGTTCTTCACTTTATGCCATTGCACAGTGCGTTGAAACTGCCGCAGAAAGTGATTGTTTGAAATGCATGCAAGTTGCATACAACAACTTACAAAGTTGCCTTCCCAACACAGATGGTACAGCATATGATGCAGGCTGTTTTATGAGATACTCCACCACACCTTTCTTTGCTGCTAATCAAACCATTGATATTCGATCCTACTTAAAACAAGCAGGTGACATATTGGGAGCAACTGAGTTAAGAGGACCAGTTAACTACAAATATAACGATTTGAAAGCTGCAACTAAAAATTTCAGTGCTGAAAATAAACTTGGAGAAGGAGGTTTTGGTGCTGTATACAAGGGTACTCTAAAAAATGGAAAAATTGTTGCCATAAAGAAATTAGTGTTGGGAAAATCAAGCAAGATGGAGGATGATTTTGAAGGTGAAGTGAAACTTATAAGCAATGTTCATCATCGGAATCTCGTTAGACTTCTTGGTTGCTGCAGTAAAGGGGAAGAGAGAATTCTTGTATACGAGTACATGGCAAATAGTAGCCTTGACAGATTCTTATTTGGTGCTAAAGGTTCCCTCAATTGGCAACAACGTTATGATATAATTTTGGGCACAGCAAGAGGACTAGCATATTTACATGAAGAGTTCCATGTGTCCATCATACATAGAGATATAAAGACAGGCAATATCTTGCTAGATGATGATCTTCAACCCAAAATTGCTGATTTTGGTTTGGCAAGGCTTCTGCCAGGGGATCGTTCCCATCTCAGCACAAAATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATACACGGTCAATTATCAGAGAAGGCTGATACCTACAGCTATGGTATTGTAGTTTTAGAAATTATAAGTGGTCAAAAGAGTACTGATGTGAAGAATGAGGAGGAATGTCGTGAATACCTTCTTCAACGAGCTTGGAAACTGTATGAGAGAGGCCTGCAGTTGGAGCTTGTGGACGAGGCCATAGACCCTAATGAGTATGATGCAGAAGAAGCATCTGCAGCAAGTAGGCCAACAATGTCTGAAGTAGTAGTGCTACTCAAAAGCAAGAGCTTAATGGAGCACATGCGACCAACTATGCCTGTGTTTGTTGACACCAATATGATAAATAGGGAAGGCAACTCTGCTAGTTCATCTAATGCCACTGTCTCCGTTTCTGTTCTATCAGCTCGATGA | 1752 | 0.4161 | MLGLLKLLALTLIWWSSSVVEHADAATLKTRLINTGCSPFNASNARSFLANVNDSLSEMRAEISNQSKLFGTSQKSRSGTLTYTMFQCRNYLSKNDCLSCFDTASTQIRNCSKANGARVIYNDCFLRFYQQTNELGSGVTCGNTSLKTTRDFKVLGQQALTDIQTATPKTKGFYAATKTQVDDGSSLYAIAQCVETAAESDCLKCMQVAYNNLQSCLPNTDGTAYDAGCFMRYSTTPFFAANQTIDIRSYLKQAGDILGATELRGPVNYKYNDLKAATKNFSAENKLGEGGFGAVYKGTLKNGKIVAIKKLVLGKSSKMEDDFEGEVKLISNVHHRNLVRLLGCCSKGEERILVYEYMANSSLDRFLFGAKGSLNWQQRYDIILGTARGLAYLHEEFHVSIIHRDIKTGNILLDDDLQPKIADFGLARLLPGDRSHLSTKFAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTDVKNEEECREYLLQRAWKLYERGLQLELVDEAIDPNEYDAEEASAASRPTMSEVVVLLKSKSLMEHMRPTMPVFVDTNMINREGNSASSSNATVSVSVLSAR | 583 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu2g01921 | 583 | ProSiteProfiles | Protein kinase domain profile. | 281 | 555 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu2g01921 | 583 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 249 | 357 | - | - | |
Vimu2g01921 | 583 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 83 | 568 | - | - | |
Vimu2g01921 | 583 | ProSiteProfiles | Gnk2-homologous domain profile. | 134 | 238 | IPR002902 | - | |
Vimu2g01921 | 583 | CDD | STKc_IRAK | 287 | 540 | - | - | |
Vimu2g01921 | 583 | Pfam | Salt stress response/antifungal | 41 | 130 | IPR002902 | - | |
Vimu2g01921 | 583 | Pfam | Salt stress response/antifungal | 147 | 235 | IPR002902 | - | |
Vimu2g01921 | 583 | Gene3D | - | 29 | 132 | IPR038408 | - | |
Vimu2g01921 | 583 | Gene3D | - | 138 | 238 | IPR038408 | - | |
Vimu2g01921 | 583 | Gene3D | Transferase(Phosphotransferase) domain 1 | 358 | 555 | - | - | |
Vimu2g01921 | 583 | Gene3D | Phosphorylase Kinase; domain 1 | 251 | 357 | - | - | |
Vimu2g01921 | 583 | Pfam | Protein kinase domain | 282 | 488 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu2g01921 | 583 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 136 | 238 | - | - | |
Vimu2g01921 | 583 | ProSitePatterns | Protein kinases ATP-binding region signature. | 287 | 310 | IPR017441 | GO:0005524 | |
Vimu2g01921 | 583 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 358 | 547 | - | - | |
Vimu2g01921 | 583 | ProSiteProfiles | Gnk2-homologous domain profile. | 30 | 133 | IPR002902 | - | |
Vimu2g01921 | 583 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 401 | 413 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu2g01921 | 583 | SMART | serkin_6 | 281 | 561 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu2g01921 | 583 | SUPERFAMILY | Protein kinase-like (PK-like) | 269 | 565 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu2g01921 | Vimu-Chr2 | 14019590 | 14022703 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu2g01921 | 29 | 583 | Receptor kinase-like Gene Family | AT1G70520 | 34.615 | 8.74e-115 | 354 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vimu2g01921 | Pkinase | 6.9e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu2g01921 | - | - | gmx:112997608 | 912.524 |