Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01892 ATGGACAGGTGCTACGGCTCCAACATCCTCGTCGCGTTCGACACTGCTGTGGCCGACGACGTCGATGTGGTGTCGCTTAGCGTCGGAGGAGTGGTGGTGTCGTACCACCTCGACAAGATTGCGATTGGCGCCTTCGGCACCAACTCGGCTGGCATGTTTGTTTGCTCCTCAGCTGGCAATGGCAGTCTCGGTGGCCTCACAGTGACGAATGTGGCGCCTTGGGTTACCACCATAGGTGCTGGAACTATAGATAGAGATTTTTCGGTACTCTTGTCAGTGGCAAGATTGCTCTTTGCATCCCAAATTTGTGTCATTTATAATATTTAA 327 0.5229 MDRCYGSNILVAFDTAVADDVDVVSLSVGGVVVSYHLDKIAIGAFGTNSAGMFVCSSAGNGSLGGLTVTNVAPWVTTIGAGTIDRDFSVLLSVARLLFASQICVIYNI 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01892 108 SUPERFAMILY Subtilisin-like 4 97 IPR036852 GO:0004252|GO:0006508
Vimu2g01892 108 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 89 IPR045051 -
Vimu2g01892 108 Gene3D Peptidase S8/S53 domain 2 83 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01892 Vimu-Chr2 13785623 13785949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01892 4 88 Subtilisin-like Serine Gene Family AT3G14240 75.294 6.44e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01892 - - gsj:114418214 116.701