Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01879 ATGGTGGTGAAGGTGTATGGTGATGTAAGGGCAGCATGCCCTCAAAGAGTCATGATGTGCCTCTTGGAGAAAGGAGTAGACTTTGAACTTGTGCCTATTGATCTTCAACAGGGACAACATAAGACACCTCAATTCCTTCTCCTACAGCCCTTTGGTCAAGTTCCAGTTGTGGAAGACGGTGATTTCAGGCTCTTTGAATCAAGAGCTATTGTAAGGTACTATGCAACAAAATATGCAGAGCGTGGTAGTGAGCTATTGGGTAAAACCTTAGAGGAAAGGGCTTTGGTGGAGCAGTGGCTTGAAGTAGAAGCACACAACTTCAATAATTTGTGCTTCACTATAATGTTTCAGCGTGTGATCCTACCAAGGATGGGTAAGGTTGGGAACTTGAGCTTGGCAGACAAAAGTGAGAAAGATTTAGGGAAGGTCCTTGATGTGTATGAAAGTAGGCTCTCTGAAAGCACATATCTTGCAGGAGATTTTTTCTCTTTGGCTGATCTCAGCCACCTTCCAGGGCTTGGACATCTTATTGAAGAAGCCAAACTTGGCCACTTGGTAACTGAGAGGAAGAATGTCTATGCTTGGTGGCAGAAAATTTCAAGCAGGCCATCTTGGAAGAAGTTAAAGGATCTGGCTCACTGA 642 0.4424 MVVKVYGDVRAACPQRVMMCLLEKGVDFELVPIDLQQGQHKTPQFLLLQPFGQVPVVEDGDFRLFESRAIVRYYATKYAERGSELLGKTLEERALVEQWLEVEAHNFNNLCFTIMFQRVILPRMGKVGNLSLADKSEKDLGKVLDVYESRLSESTYLAGDFFSLADLSHLPGLGHLIEEAKLGHLVTERKNVYAWWQKISSRPSWKKLKDLAH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01879 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 213 IPR010987 -
Vimu2g01879 213 SFLD Glutathione Transferase (cytosolic) 4 202 IPR040079 -
Vimu2g01879 213 Pfam Glutathione S-transferase, N-terminal domain 1 73 IPR004045 -
Vimu2g01879 213 FunFam Glutathione S-transferase F2 87 209 - -
Vimu2g01879 213 CDD GST_N_Phi 2 77 - -
Vimu2g01879 213 SUPERFAMILY GST C-terminal domain-like 82 208 IPR036282 -
Vimu2g01879 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Vimu2g01879 213 Pfam Glutathione S-transferase, C-terminal domain 129 203 IPR004046 -
Vimu2g01879 213 CDD GST_C_Phi 91 209 IPR034347 -
Vimu2g01879 213 Gene3D Glutaredoxin 2 86 - -
Vimu2g01879 213 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 209 - -
Vimu2g01879 213 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Vimu2g01879 213 Gene3D - 87 208 - -
Vimu2g01879 213 FunFam Glutathione S-transferase F2 2 86 - -
Vimu2g01879 213 SFLD Main (cytGST) 4 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01879 Vimu-Chr2 13647395 13651139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01879 1 212 Glutathione S-transferase Gene Family AT3G03190 53.774 3.71e-84 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01879 K00799 - gmx:100796010 362.844