Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01817 ATGTTTGCTAATGATGGAAAAAGTGTTGTGATGAAAGGGGTGACACACGATGCCTGTGATCATCTGATTAAACCTGTGAGAATTGAGGCTTTGAAGAACATATGGCAGCATGTGATTCGGAAGAGAAAGAATTGGTTGAAAGATGCAGAGCAATCAGGTAGTTTGGAATCTCGAAGTGTTACAAGGAGTCGCCGGCAACACCGTATGTCTCTAGGGTCATCGTCGGCCACTGTGAAACCTCTCCTCTCCTGGCTTCTCTTCGAGCGCGAGAGGGAGACACCCTTCTCCTCCGTGACACTATCCTGTCAAGGTTTGAATGATAAGGTTTGA 330 0.4667 MFANDGKSVVMKGVTHDACDHLIKPVRIEALKNIWQHVIRKRKNWLKDAEQSGSLESRSVTRSRRQHRMSLGSSSATVKPLLSWLLFERERETPFSSVTLSCQGLNDKV 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01817 109 SUPERFAMILY CheY-like 4 67 IPR011006 -
Vimu2g01817 109 ProSiteProfiles Response regulatory domain profile. 1 39 IPR001789 GO:0000160
Vimu2g01817 109 Gene3D - 1 105 - -
Vimu2g01817 109 MobiDBLite consensus disorder prediction 47 74 - -
Vimu2g01817 109 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 90 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01817 Vimu-Chr2 13134249 13134578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01817 1 68 Response Regulator Gene Family AT3G16857 61.765 1.65e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01817 - K14491 gmx:100814930 99.3673