Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01810 ATGGCGCTGCCATGGTTGAGATTGAAACCAAAACCAAAAGCTTCGTCACTTTCAATAATCCTAACCACCACACTCATTCTTCTCGTATTCGTCTTCTTCTCGATAAACCCTCTTTCTCCCATTTCCACACCACGGAGGTCACTCCTCATCGCTCCCTCACCGTGTTCCGCCAAATCCGATGGAATCCTCAAATACCAATGTCTCTTCCCACAACACACCGCTCTCTCCATTCCCATCCTCTCCTTATTCCTCCTCCTTCACTTCTACATCCTCATCACCACCGCCCAGGACCACTTCTCCCTCGTCACCACCAAACTCGCCTCCCACCTCGCCCTCTCCCCCAGCATGGCCGCCGTCACGCTTCTCTCCCTCGGCAACGGTGCTCCCGACGTCTTCTCCTCACTCGCAGCCCTCCGCGCCGGCCAGTACCGCACTGGCTTCGGCGCTATACTCTCCGCCGGCACCTTCGTCTCCGCCCTCGTCGTCGGCTTTGTCGCCATCTACGCCGCGCCCTTCTCCGTCGATCCCGCGCCTTTCGTTAGGGATGTTCTCTTCTACCTCACCGCTGCAATGTTCCTCTTCTACGTCTACCTCAGCGCCGAGATTTTCCTCTGGCAGGCTGTCGGCTTCGTTGCCTTCTACTTGTTCTTCGTAGGGTTTGTCTTCTACATGGATTTGGGGATGGCGGATCGCGCTCAAAAGAGTTCCGCGGATCTCGAGGGACAGTTGGAATCAGATCCCGACGCTGAAGTTTCGAGATCAGTCGAGGGAGAGAAACGCGCTTCTGGAGTGCGTGGAGCGTTTCGATTGGTACGTTGTTGTTGTTGTTGTTGTTACTGTAGTGGTTTCCATGTCGTGTGCTTTAGGGAATTTTATGCATTGCATGGATATGTTTCTAATTCTGGTTCTTTACGATATTGCTTAATCACTCTTCTTGAGGCAGTCCTGACTTTTTCATCCCTTGCCCTATGCACTCAGATTTCTAAAACATGGGAGCTTCCTGTGGAAACTGTCCTCAGATTGACGATACCTCAGCCAGCACCAGCTCAATGGAGCAGATTTTATGCATCGGCCAATATTGCACTTTGTCCACTGGCCCTCTTGTACGCCTGCAACTCATTCATGCCATTTAATCACTCCATAGTTTTCCTCCTCCCCAACACTCACTTTCCCCTCTGGTCAGTTGTTTTCATGGCAAGCTTCTCTCTTGCATTTCTTCATTTTATAATTGAAAAGGAACCCCCCAAAACAGAGCATCTGCCCGTGGTTGTCATGGCATTTGTGATGAGCGTGTTCTGGATATCTACTACGGCTGGAGAGCTGGTGAACTGCCTGGAAGCTATAGGCACACATCTCAAACTGCCCCCAGCACTCCTGGGTCTTACTGTGCTGGCATGGGGAAATTCAGTAGGTGATCTTGTTGCCGATGTTGCAGTTGCTAAAGCCGGTCATCCGGCGATGGCTATGGCGGGATGTTTCGCCGGACCAATGTTCAACATGCTTGTTGGCCTTGGAAGTGCTTTAGTCATACAGACGGCCAATGTATATCCTAGAGCTTATCAGCTTAATTTCCACTTTGGTATAGTTATCGCATTTGTATTCCTGCTTTTAAGCCTTATGGGGTCTCTCTTAGTGATCACTTGGTGCAGATTCAGAGTGCCTAGGTTTTGGGGATTCTGTCTGGTAGGCATCTATGCTGCTTTTACGGCAGCAAGTTTAGGAATAGCCATGTTCTCAGGGTGA 1743 0.5066 MALPWLRLKPKPKASSLSIILTTTLILLVFVFFSINPLSPISTPRRSLLIAPSPCSAKSDGILKYQCLFPQHTALSIPILSLFLLLHFYILITTAQDHFSLVTTKLASHLALSPSMAAVTLLSLGNGAPDVFSSLAALRAGQYRTGFGAILSAGTFVSALVVGFVAIYAAPFSVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAVGFVAFYLFFVGFVFYMDLGMADRAQKSSADLEGQLESDPDAEVSRSVEGEKRASGVRGAFRLVRCCCCCCYCSGFHVVCFREFYALHGYVSNSGSLRYCLITLLEAVLTFSSLALCTQISKTWELPVETVLRLTIPQPAPAQWSRFYASANIALCPLALLYACNSFMPFNHSIVFLLPNTHFPLWSVVFMASFSLAFLHFIIEKEPPKTEHLPVVVMAFVMSVFWISTTAGELVNCLEAIGTHLKLPPALLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVIQTANVYPRAYQLNFHFGIVIAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGIYAAFTAASLGIAMFSG 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01810 580 Gene3D - 112 243 IPR044880 -
Vimu2g01810 580 Gene3D - 356 573 IPR044880 -
Vimu2g01810 580 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 316 578 - -
Vimu2g01810 580 Pfam Sodium/calcium exchanger protein 81 222 IPR004837 GO:0016020|GO:0055085
Vimu2g01810 580 Pfam Sodium/calcium exchanger protein 424 573 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01810 Vimu-Chr2 13095037 13097257 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01810 39 579 Antiporters AT1G08960 63.024 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01810 K13754 - gmx:100775437 719.924