Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01754 ATGGAGTGCAACAAAGATGAAGCTGTGAGGGCTAAGCAGATTGCAGAAAATAAGATGCAAGCTGGTGACTATGAAGGGGGGCTGAAATTTGCTACAAAAGCCCAAAGGCTGTTTCCTGATATTCAAAACATTGTTCAGATCCTTGCAGTTTGTGAGGTCCACTGTGCTGCTCAGAAGAAACCCTCTGGGTCTGACATGGACTGGTATGGAATTCTCCAGACTCAACAATCTGCCGATGAAGCAACCATTAAGAAACAGTATAGAAAGCTTGCACTGCTACTTCATCCTGATAAAAATAAATCTGCTGGTGCAGAGGCTGCTTTCAAGTTGGTTGGTGAAGCTAACAGAGTGTTAACCGATCAATCAAAGCGTACTCGGTATGACTCAAAATTTGGAGTTTCAGCAGGAAATACAGCAGCTAAGGTCGCCCCTTGTCACCCAAATGGAAATGCTTATCAGAACATTTTTAATTCACAGCCTCATGCTTGGAATCCATATCATCAGTTTGAAAGTTCGACATTCTGGACATGTTGTTGTCATTGTAATACTAGATATCAATACTACAAAACTATTTTAAATCAGACCATACGCTGTCAACAGTGTTTTAAACCCTTTACAGCTCATGATATGGGGAACCCCAATGTGGCACAAACATATTGGTCATCTTTCAATAATCACCAAGGGTCTGCAAAACATGCATCGTCTAAAGAAGCATCAAAAGGCAATGGTGGAAAATCTCGAGGTAGAGAAGAAGAGGGTGTGCCCATGTCAAAATCCAGTGCGGGAGTTGGTGCCTATTCTAAAGTTGCAAATGGCAGAAATGGCCATGTGGCTGCAGGAGTGGCAAAGGCTGATGTTAAAGCGTCCAAAACCAAGGAATCGCGAGCCTCAACGAAGGTTGGTTGTAAAAGAGCAAGGCAGTCAGCATCATATAATAATAACAAAGCTGGAGATGGTAAAGGCATGAAAGACACCAAGGATGAAGAAAATACGGTTGATCCTTCTAGGAAAACTTCAAGGAAAAAACAGCATGTTCTGTACCCAGAAACTGATAAAGCTGGTGATTTTGGAAGCTCATCCAAAAGTACAAAACATCATGAATCATCTACCACCCCTAGAGTAGAGGAAAAAGAAGTGTCAGCAACTGGTGATGGTGATCAGAATGGGGAGACAAGAAATAAAGCAGGTGCACTACATGAAGAAACAATTTTAAGGAATAGAGCCAAAGTTGAGCAGACTAATGTGCAAGGAAAGGAGGTATTGAACTCAGATCTCAATGATAGAAAGTCTAAAGCTTTATATTGTTCTCCATCGAAGTCAAATTTATCTCCCAATTCAGAGATTGTCTGTCCTGATACAGATTTCAGTGATTTTGATAGAGATAAGGCAGAGGATTGTTTTGCTGTTAATCAATTATGGGCTATTTTTGACAATATTGATGGTATGCCACGATTCTATGCTCTTGTGAAGAAAGTCTACTCCCCTTTCACGTTGCGGATTACTTGGCTAGAAGCTGACTCAGATTACCAAGGTGAGATTGACTGGCATAAAGCCGGTTTGCCTATTGCTTGTGGTAAGTTCAGACTTGGTCATTCTCAGAGTACTTCAGATCGTTTTATGTTTTCTCATCAGATGCATTGCATAAAAGGAAGTAGGACTACATATCTGATATACCCAAAGAAGGGAGAAACTTGGGCAATTTTCAGACATTGGGATCTTGGATGGAGTTCAAATCCAGAAAAGCATTTTGAGTATGAATTTGAATATGTGGAAGTTCTATCAGATTTTGATGAAAATTTAGGCATTGAAGTTGCTTATCTTGGCAAACTGGCAGGGTTTGTTAGTCTCTTTCAACATACTGTATTGGATGGTATTAGCTTATTTTGTGTATCACCTCGTGAGATGTACAAGTTCTCTCATCGGATTCCTTCTTACAAGATGACAGGTGCTGAAAGGAAAGGTGTTCCAAGTGGATCTTTTGAACTTGATCCTGCTGGTCTGCCTACTTGTCTTTTTGGAGTTGGTGATACTGGTGTTGCGAAAATGGATGGAGTCAATTGTTCCCACCAGGAATATGCAAACTCTAAAGTGGAACAGGCAACTTCTAATGATAGTATTCACAAATCAAAGTTGCAAGAGACTATTGATGCCGACAGAACATCACAAATTCTCAGAAGGTCTCCAAGATCGAGCCAAAAAAATATGGACAATGGCCAAGCAAGCACTGTTCAATTCACGGTCAGAAAGGATGACATAAACATTGACCACAGGGACTACAGTCCCCCAGAAGGAAGCGCTACTAATGAGAGGAAGGTCAAGAAACCTCAGAAACACGAGAAAAATAGTTATGATGGAGAGACATTGAATAAGTTGCATAAAGATCTAAGCAAGAAAAATGTTCTAGGAGATGCATCTGAAAGGACATGTAAGTTGACTGTTAATCATTCAAAAAACAGCAATAATCTGAAGAGTAGCAACACTCCTCAGTTTGGAGAATCATGTTACGACTTTAAGAAGGAAAAATCTGAAAAGACTTTTCAGTGTGGTCAGATATGGGCAGTATATTGTGATAGGGATTATATGCCCAATACTTACGCTCAAATTAAGAAGATTGAATTCACTCCTAATTTTAGATTGCAGGTTTCCATGCTTGAACCGTGCTCACCGTCAGGTGATCTTAAAAGAACAATATCTTGTGGCACCTTCGATGTTAAAAAACGCAAATTACAGATTCTCTCTCTCTCTGCATTCTCTCATCAGTTAAAAGTTGAACCTTCGGTAAATAATAGATATGAAATTTACCCTAGAAAAGGTGAGGTTTGGGCTCTGTACGGGGACCAGAACTATGAGCTGACTTCTTCAAAGCAGGGCAAAGGTAAATGTGATATAGTAGAAGTATTAGCAGATAGTGACAAGAGTATACAGGTTGTTGTTCTGACGCCACATAGCAACTCCAAGACAATTTTCAGAGCTCCTAGAATTCAGAGATCTAAAACTGGTGTAATTGAAATATTAAGAGAAGAGGTTGGCAGATTTTCACATCAGATTCCTGCTTTTCAGCACAGGGACAATGTGCATCTCAGAGGGTGTTGGGAGCTTGATCCTTCTTCAGTTCCTGGTTCTTTCGTACCAATAAACTGA 3141 0.4018 MECNKDEAVRAKQIAENKMQAGDYEGGLKFATKAQRLFPDIQNIVQILAVCEVHCAAQKKPSGSDMDWYGILQTQQSADEATIKKQYRKLALLLHPDKNKSAGAEAAFKLVGEANRVLTDQSKRTRYDSKFGVSAGNTAAKVAPCHPNGNAYQNIFNSQPHAWNPYHQFESSTFWTCCCHCNTRYQYYKTILNQTIRCQQCFKPFTAHDMGNPNVAQTYWSSFNNHQGSAKHASSKEASKGNGGKSRGREEEGVPMSKSSAGVGAYSKVANGRNGHVAAGVAKADVKASKTKESRASTKVGCKRARQSASYNNNKAGDGKGMKDTKDEENTVDPSRKTSRKKQHVLYPETDKAGDFGSSSKSTKHHESSTTPRVEEKEVSATGDGDQNGETRNKAGALHEETILRNRAKVEQTNVQGKEVLNSDLNDRKSKALYCSPSKSNLSPNSEIVCPDTDFSDFDRDKAEDCFAVNQLWAIFDNIDGMPRFYALVKKVYSPFTLRITWLEADSDYQGEIDWHKAGLPIACGKFRLGHSQSTSDRFMFSHQMHCIKGSRTTYLIYPKKGETWAIFRHWDLGWSSNPEKHFEYEFEYVEVLSDFDENLGIEVAYLGKLAGFVSLFQHTVLDGISLFCVSPREMYKFSHRIPSYKMTGAERKGVPSGSFELDPAGLPTCLFGVGDTGVAKMDGVNCSHQEYANSKVEQATSNDSIHKSKLQETIDADRTSQILRRSPRSSQKNMDNGQASTVQFTVRKDDINIDHRDYSPPEGSATNERKVKKPQKHEKNSYDGETLNKLHKDLSKKNVLGDASERTCKLTVNHSKNSNNLKSSNTPQFGESCYDFKKEKSEKTFQCGQIWAVYCDRDYMPNTYAQIKKIEFTPNFRLQVSMLEPCSPSGDLKRTISCGTFDVKKRKLQILSLSAFSHQLKVEPSVNNRYEIYPRKGEVWALYGDQNYELTSSKQGKGKCDIVEVLADSDKSIQVVVLTPHSNSKTIFRAPRIQRSKTGVIEILREEVGRFSHQIPAFQHRDNVHLRGCWELDPSSVPGSFVPIN 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01754 1046 MobiDBLite consensus disorder prediction 709 723 - -
Vimu2g01754 1046 PRINTS DnaJ domain signature 103 123 IPR001623 -
Vimu2g01754 1046 PRINTS DnaJ domain signature 69 87 IPR001623 -
Vimu2g01754 1046 PRINTS DnaJ domain signature 87 102 IPR001623 -
Vimu2g01754 1046 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Vimu2g01754 1046 MobiDBLite consensus disorder prediction 286 300 - -
Vimu2g01754 1046 MobiDBLite consensus disorder prediction 358 383 - -
Vimu2g01754 1046 MobiDBLite consensus disorder prediction 697 799 - -
Vimu2g01754 1046 SMART dnaj_3 66 123 IPR001623 -
Vimu2g01754 1046 MobiDBLite consensus disorder prediction 749 799 - -
Vimu2g01754 1046 SUPERFAMILY Chaperone J-domain 64 130 IPR036869 -
Vimu2g01754 1046 MobiDBLite consensus disorder prediction 226 241 - -
Vimu2g01754 1046 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1039 - -
Vimu2g01754 1046 MobiDBLite consensus disorder prediction 301 315 - -
Vimu2g01754 1046 MobiDBLite consensus disorder prediction 319 349 - -
Vimu2g01754 1046 CDD DnaJ 67 120 IPR001623 -
Vimu2g01754 1046 MobiDBLite consensus disorder prediction 226 261 - -
Vimu2g01754 1046 Pfam Domain of unknown function (DUF3444) 446 651 IPR024593 -
Vimu2g01754 1046 Pfam Domain of unknown function (DUF3444) 833 1021 IPR024593 -
Vimu2g01754 1046 MobiDBLite consensus disorder prediction 724 748 - -
Vimu2g01754 1046 MobiDBLite consensus disorder prediction 281 399 - -
Vimu2g01754 1046 Pfam DnaJ domain 67 128 IPR001623 -
Vimu2g01754 1046 Gene3D DnaJ domain 53 143 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01754 Vimu-Chr2 12608013 12620901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01754 4 210 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.434 1.04e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01754 - - var:108342824 1986.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01754 2 12608013 12620901 Vimu2g01754 2 12608013 12620901 ECH
Vimu2g01754 2 12608013 12620901 Vimu3g02139 3 36217729 36218658 PCT