Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01746 ATGGGTACTGAATTAAGTTACGCACTTTCAAAATTGCATATGCTATCCACTTCAGATTATGCCTCCGTTGTGTCCATGAACATTTTTGTGGCTCTGCTGTGTACTTGCATTGTCATTGGCCATCTTCTTGAGGAGAATCGCTGGGTGAATGAATCTATCACTGCCCTTTTTATAGGTGTTTGCACTGGTGTAGTCATTCTGTTGCAAAGTCGCGGCAAAAGCTCGCATCTTCTAGTTTTCAGTGTCATACAAATCTTTAAGAGAATGGGTGTTGGAAAATCACTGGAGATAGGAGATTATCTAGCAATTGGGGCAATATTTGCTGCAACAGATTCAGTGTGCACATTGCAGGTGCTAAACCAGGATGAGACACCTTTACTATATAGTCTTGTGTTTGGCGAGGGTGTTGTTAACGATGCTACATCTGTTGTGCTTTTCAATGCAATCAAAAGTTTTGATCTCGACATAATTGACCACAGAATTGGTTTGCATTTTTTCGGCAACTTCTTCTACCTGTTTATCGCAAGCACCATGCTTGGGGTTTTGGCTGGTCTACTCAGCGCTTACATTATTAAAACGCTTTATATTGGCAGGCACTCTACAGATCGCGAGGTTGCTCTTATGATGTTAATGGCATACCTTTCCTATATTCTAGCTGAATTATGGTATCTGAGTGGCATTCTCACTGTATTCTTCTGTGGGATTGTTATGTCACATTATACTTGGCATAATGTGACTGAGAGCTCGAGAATCACTACTAAACATGCTTTTGCAACTCTCTCTTTTGTTCTTGAAACCTTTATCTTCCTTTATGTTGGTATGGATGCGTTGGACATTGAAAAGTGGAGGTTTGTTAGCGATAGGCCGAAAACATCTGTTGCTGTTAGTTCAGTTTTATTGGGTCTCGTACTTGCCGGAAGAGCAGCATTTGTTTTTCCCCTATCCTTCTTATCAAACCTCACTAAAAAGTCTCAAAGTGAAAAAATAAGCTTCAGGGAGCAGGTGATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCCTATAATCAGTTCACCTTGTCAGGTCACACTGAACTGCGAACCAATGCCATCATGATCACCAGTACCATCACTGTCGTGCTTGTCAGCACAGTGGTGTTTGGTTTGATGACCAAGCCACTCATAAGGTTTTTGCTGCCAGTTAGTCCACCTCCTAAACGCAAGAACAGCTTGGGAAATATGGAATCATCTAATAATCCTCCAAAATCAATCACTGTGCCCTTTCTTGGAGGCTCTCATGATTCTGAAAACGAACTTGATGGCAATGAAGATCATCGTCCAAACACTATTCGTGCCTTACTAAGCACTTCAAGTCATAATGTTCATCACTTATGGCGTACGTTTGATAATTCAATCATGCGTCCAGTTTTCGGCGGTAGGGGATTTGTTCCTGTGGATACTACCTCACCAACTGGCAGAAGTAATAGTCAACAGTGGCATTAA 1497 0.4175 MGTELSYALSKLHMLSTSDYASVVSMNIFVALLCTCIVIGHLLEENRWVNESITALFIGVCTGVVILLQSRGKSSHLLVFSVIQIFKRMGVGKSLEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLDIIDHRIGLHFFGNFFYLFIASTMLGVLAGLLSAYIIKTLYIGRHSTDREVALMMLMAYLSYILAELWYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVLETFIFLYVGMDALDIEKWRFVSDRPKTSVAVSSVLLGLVLAGRAAFVFPLSFLSNLTKKSQSEKISFREQVIIWWAGLMRGAVSMALAYNQFTLSGHTELRTNAIMITSTITVVLVSTVVFGLMTKPLIRFLLPVSPPPKRKNSLGNMESSNNPPKSITVPFLGGSHDSENELDGNEDHRPNTIRALLSTSSHNVHHLWRTFDNSIMRPVFGGRGFVPVDTTSPTGRSNSQQWH 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01746 498 MobiDBLite consensus disorder prediction 405 444 - -
Vimu2g01746 498 PANTHER SODIUM/HYDROGEN EXCHANGER 82 475 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vimu2g01746 498 Gene3D - 96 148 - -
Vimu2g01746 498 MobiDBLite consensus disorder prediction 407 423 - -
Vimu2g01746 498 MobiDBLite consensus disorder prediction 479 498 - -
Vimu2g01746 498 Pfam Sodium/hydrogen exchanger family 80 393 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01746 Vimu-Chr2 12535029 12538864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01746 10 493 Antiporters AT3G05030 66.791 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01746 - - gmx:100789667 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01746 2 12535029 12538864 Vimu2g01746 2 12535029 12538864 ECH
Vimu2g01746 2 12535029 12538864 Vimu3g02145 3 36258289 36263623 PCT