Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01745 ATGTGGCAGAAGGGAGGAAGAGAATCGAAGAGGACGAAATGGAACAATAAAGCCATACTCCATTATAGCCACTGTAAAGTTCTGTTAAGTCTTCAGGCAAAGCAAAGTCGAAATCAAAATCGAAGTAAAATGGGCGCTCAGAAGAAAAGCGGCGCTAGGGTTTCCGAGGACCCCGACGAACTGGTGCGGATTCCGTTACAGGCCATTCTCTTGGCTGATAGTTTCACCACCAAGTTCAGACCTATAACGCTCGAACGCCCCAAAGTGCTGCTTCCGCTCGTGAATGTTCCGATGATAAATTACACGCTGACTTGGCTCGAATCCGCCGGCGTCGAAGAGGTTTTCGTATTCTGCTGTTCTCACTCCAAGCAGGTCATTAACTACCTCGAGAAATCCGAGTGGCTATCTCAACCGAGTTTCACGGTGACGACTATAGAATCGCAGAACTCTGTTAGCGCCGGAGATGCTCTCCGCGTAATCTACGAGCGCAATGTGATACAAGGAGACTTTGTCCTTATCAGTGGAGATACTGTGAGCAACATGTCACTTACTCAGGCACTTCTGGAACATAAAGAAAGGAGGAAGAAAGATAATAATGCAGTAATGACTATGGTCATTAAACGGTCAAAACCTAATCCAGCTATTCATCAATCTCGACTTGGTACTGATGAACTTTTTATGGCTATTGATCCTAATACCAAGCAGCTTGTGTATTATGAGGATAGGGCTGACCAATCAAGAGGGACACTACAGCTTGACAAGTCATTGCTTGTTGATAATCCTTCGCTCTCTCTGCATCATGATAAGCAGTTCACTAAGTTAGCAATATCTTATCTGCAGGATTGTTACATTGACATTTGCTCGCCAGAAGTACTTAGTCTATTTACAGACAATTTTGACTACCAACATCTACGGCGTCATTTTGTCAAGGGATTGCTTCTTGATGATATAATGGGCTACAAAATTTTTGTTCATGAAATCCACTCAGACTATGCTGCAAGGATTGATAATTTCCGAAGTTATGATACTGTCAGCAAGGATATAATTCATCGATGGACTTATCCACTGGTGCCTGATGTAATGAATTTTGGCCATACTGCGACTAAACTTGAACGACAAGGAATGTACCGTGCTTTAGAAATATCACAATCGCAGTCTGCTGTTATTGGCCCTTTCACTGTCATTGGATCTGGCACCAAAATTGGGAATCACAGTAAAATTTTGAATTCCGTTATTGGTGAAGGATGTAAAATTGGGTCAAATGTTATCATAGAGGGATGCTATATATGGGATAACATCATCATAGAAGATGGCTGTAAACTCCAGCATGCAATTGTATGTGATGGAGTGATTATAAAGTCAGGGGCTGTTCTGGAACCTGGTGTTATTTTGTCTTTTAAGGTTGTAGTTGGGCCAGAGTTTGTTGTTCCTGCATATTCGAAAGTATCTCTTTTTCAGCAGCCAATTGAGGAGGACAGTGACGAGGAGCTTGAATATGCTGATAGTACTAGTGTCATAGGCAGCCAAGTGGATAAATCAGATGTAGAGATTGCTTCCAAAGTATTGGAGACAAATTTTAGTCCGGCTTCTCAGCTAGGTGTGGGTGGGGCAGGTCATGTTTGGTCAACATGTGAAGGTGGCCTTGAAGAAGAGTGGAGGCACTCGGTGGCACCTATTCCTAAAGATAAAATTCAGGAGGCTATCAAAACTATGGAAGATGATATGGAGTTTGCTCCGGATGACATGTTTCTCCCACCTTCTGGAGAGCTGAAACCTAATTCTAATGATTCAGATGATGATGATCATGAAGATTCGAGAGATGACTCTTATTACTTTGAGAAAGAGGTTGAAGCAACCTTTCTTAGAGCTGTGCATGAAAACATACAAGAAAGCCATTTGATCTTAGAAATCAATTCTTTGAAGTTGTCATACAATAAAGAGACTTCTGATTGTGCTGGAGCGTTATTTTATGCCATGATGAAGTATGCTTTAGACATCCCCCATAGTTCATCTGATGGTTTGCTTCAAAATGTTCAAGGTGTATTTACAAAGTGGAAAAAGGCTCTTACATCCTATCTGAATGGCAACGATGAGCAGATTGAAGTAATACTTAAATTTGAAGAAATGTGTTTGGAGTCGGCTAAGGAGTTTGCTCCATTGTTCACAACGATATTGCACCACTTGTATAATGACGATTTTGTAGAAGAAAATGCTATCTTGAGTTGGGAAGATGAGAAGAAAGATGCTGATGAGGCAGATAAAGTTTTTGTTAAGCAAGCCCAAAAGTTCATTCAATGGCTAAAAGAGGCACCGGAAGAAGACGAAGATGACGAGGAATGA 2340 0.415 MWQKGGRESKRTKWNNKAILHYSHCKVLLSLQAKQSRNQNRSKMGAQKKSGARVSEDPDELVRIPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLTWLESAGVEEVFVFCCSHSKQVINYLEKSEWLSQPSFTVTTIESQNSVSAGDALRVIYERNVIQGDFVLISGDTVSNMSLTQALLEHKERRKKDNNAVMTMVIKRSKPNPAIHQSRLGTDELFMAIDPNTKQLVYYEDRADQSRGTLQLDKSLLVDNPSLSLHHDKQFTKLAISYLQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIFVHEIHSDYAARIDNFRSYDTVSKDIIHRWTYPLVPDVMNFGHTATKLERQGMYRALEISQSQSAVIGPFTVIGSGTKIGNHSKILNSVIGEGCKIGSNVIIEGCYIWDNIIIEDGCKLQHAIVCDGVIIKSGAVLEPGVILSFKVVVGPEFVVPAYSKVSLFQQPIEEDSDEELEYADSTSVIGSQVDKSDVEIASKVLETNFSPASQLGVGGAGHVWSTCEGGLEEEWRHSVAPIPKDKIQEAIKTMEDDMEFAPDDMFLPPSGELKPNSNDSDDDDHEDSRDDSYYFEKEVEATFLRAVHENIQESHLILEINSLKLSYNKETSDCAGALFYAMMKYALDIPHSSSDGLLQNVQGVFTKWKKALTSYLNGNDEQIEVILKFEEMCLESAKEFAPLFTTILHHLYNDDFVEENAILSWEDEKKDADEADKVFVKQAQKFIQWLKEAPEEDEDDEE 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01745 779 Gene3D - 599 778 - -
Vimu2g01745 779 SUPERFAMILY ARM repeat 612 770 IPR016024 -
Vimu2g01745 779 SMART 542_3 686 773 IPR003307 GO:0005515
Vimu2g01745 779 FunFam Translation initiation factor eIF-2B subunit epsilon 55 356 - -
Vimu2g01745 779 Pfam Nucleotidyl transferase 68 208 IPR005835 GO:0009058
Vimu2g01745 779 Gene3D Hexapeptide repeat proteins 380 490 - -
Vimu2g01745 779 CDD LbH_eIF2B_epsilon 394 472 - -
Vimu2g01745 779 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 59 356 IPR029044 -
Vimu2g01745 779 CDD eIF-2B_epsilon_N 66 292 IPR035543 -
Vimu2g01745 779 MobiDBLite consensus disorder prediction 35 56 - -
Vimu2g01745 779 Pfam Bacterial transferase hexapeptide (six repeats) 393 425 IPR001451 -
Vimu2g01745 779 Pfam eIF4-gamma/eIF5/eIF2-epsilon 698 777 IPR003307 GO:0005515
Vimu2g01745 779 CDD W2_eIF2B_epsilon 612 770 IPR044123 GO:0005085|GO:0031369
Vimu2g01745 779 SUPERFAMILY Nucleotide-diphospho-sugar transferases 66 449 IPR029044 -
Vimu2g01745 779 ProSiteProfiles W2 domain profile. 606 777 IPR003307 GO:0005515
Vimu2g01745 779 FunFam Translation initiation factor eIF-2B epsilon subunit 602 778 - -
Vimu2g01745 779 MobiDBLite consensus disorder prediction 578 607 - -
Vimu2g01745 779 FunFam Trimeric LpxA-like enzyme 369 502 - -
Vimu2g01745 779 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 52 779 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01745 44 770 Eukaryotic Initiation Factors Gene Family AT2G34970 63.079 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01745 K03240 - gmx:100784894 1292.33