Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01735 ATGCCTTTACTTCGCATCGCAAGCAAGATTTTACATTCAGCAGGAAATCAAAGTTGCAAGTGCCAGCACCGAACAATCTTTGCCACGGCACAATTGCAGGGTTCATGGATGGAGAAGGTCAAAAACGTCATCACAGGCCAGAAGACCACGCAGTCCCCGGGAGACGGGGCACAAGCGGATTCCGATTCATTCACTCTGCTTCGTTTTGCGGATGAAATGAAAAATGCAAAAAGAGTTGGCGCTTTTAAGGAGTTCATGGTTGGACGAAGCAGCGAAGCCACTTTTTCCTCTGCCTTCGAGAAATACGAAGCCATAATTCGATATCTTGGGGTTTTGGACCCCACTGGAGAGAATCTTCAGACTGCTCAAAAGCAACAAGCGGCAAAGCATTGTAGCTGCACGATTGCTGATGTAGAGAATGCACTTGCTAAGTTTACTTGGGCCAAAGAGGCACAGAAGAAGATAGAGAAGTTAAAAGAAGAAGGAAAACCATTGCCAAAAAGCTTTGCTGAACTCCAAAAGCTGGTTGGTTCTACCCCATTGGACCTTGCAAGATCTAATTTGGCTCAATCTGGACAAATTAGCAGGAATGCGCTCTGCCCATGTGGTTCAAAGAAGAGATATAAAAGCCTTCCTAGTTCGCTGCTATTTGTAATTCCTGGTGCTGCGGAAAGGATTGAAGGAATTCAGAGATTTAATGCTAAACTGCAAGTAAGCCTGATCGGCTATGGAGGGGATGATCAAGTGACTAGAAATCTCCGATGGAAAACGTGCGGTTCCAAAGAAGAGGCTTTGGCCTTCATAAGGGATGTTTGCATACCTCATCCATGGCGTCGCTCAATCTGCCTTGATGACTGTTCTATCGGCTTTATTTCAGTATTTCCTTGGTCAGGTGAAGAAAGGCACAAGGCTGACATAGGCTATGCCATTGGGAGCACCTATTGGGGCCAAGGGATAGCCACCAAAGCGCTCAAGATTGCTGTGCCTCAAGTCTTCAAGGACTTTCCTAATTTGCTGAGGTTGCAGGCTTTTGTTGATGTTGAGAACACAGCTTCTCAGAGGGTGTTGGAAAAAGTTGGATTCATCAGAGAGGGTGTTCTCAGAAAGTATACTTGTATCAAAGGGGTGATTAAGGATTCTGTTCTGTATAGTTTCTTGTCAACGGAAGATGTTCTTGCCGGTCACTAG 1188 0.4554 MPLLRIASKILHSAGNQSCKCQHRTIFATAQLQGSWMEKVKNVITGQKTTQSPGDGAQADSDSFTLLRFADEMKNAKRVGAFKEFMVGRSSEATFSSAFEKYEAIIRYLGVLDPTGENLQTAQKQQAAKHCSCTIADVENALAKFTWAKEAQKKIEKLKEEGKPLPKSFAELQKLVGSTPLDLARSNLAQSGQISRNALCPCGSKKRYKSLPSSLLFVIPGAAERIEGIQRFNAKLQVSLIGYGGDDQVTRNLRWKTCGSKEEALAFIRDVCIPHPWRRSICLDDCSIGFISVFPWSGEERHKADIGYAIGSTYWGQGIATKALKIAVPQVFKDFPNLLRLQAFVDVENTASQRVLEKVGFIREGVLRKYTCIKGVIKDSVLYSFLSTEDVLAGH 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01735 395 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 239 383 IPR000182 GO:0016747
Vimu2g01735 395 Pfam Acetyltransferase (GNAT) domain 246 361 IPR000182 GO:0016747
Vimu2g01735 395 Gene3D - 234 390 - -
Vimu2g01735 395 PANTHER SEC-C MOTIF PROTEIN 5 210 - -
Vimu2g01735 395 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 246 386 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01735 Vimu-Chr2 12436289 12442913 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu2g01735 Acetyltransf_3 2e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01735 - - gmx:100791282 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01735 2 12436289 12442913 Vimu2g01735 2 12436289 12442913 ECH