Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01731 ATGGTTTCTCCCACGTTTTACTTGTTTAAGCCACTTTCCGACATTGATGATCAAGATGGTTTGCGTGTCCGCGTTCCGATGATACACATTTATAAAAAGCAAGCATCAATGGCAGAGAAAGATCCAGTTCAAGTCATTCGCCAAGCACTGTCACAGACACTTGTCTTCTATTACCCATTTGTGGGTAGGCTTAGGGAGGAACCTCACCGCAAATTGATGGTGGATTGCACCGGAGAAGGTGCCATGTTCGTTGAGGCAGATGCTGACGTCACACTGGATCAGTTCGGCGATTCTCTCCAGCCTCCATTCCCATGCTTCCATGAACTGCTATACTATGTTTCTGCCTCACAACAAATTACCAATACTACCCTTCTACTCTTACAGGTATTGGAACTTTGA 399 0.4536 MVSPTFYLFKPLSDIDDQDGLRVRVPMIHIYKKQASMAEKDPVQVIRQALSQTLVFYYPFVGRLREEPHRKLMVDCTGEGAMFVEADADVTLDQFGDSLQPPFPCFHELLYYVSASQQITNTTLLLLQVLEL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01731 132 Pfam Transferase family 11 131 - -
Vimu2g01731 132 Gene3D - 2 132 IPR023213 -
Vimu2g01731 132 PANTHER ACYL TRANSFERASE 4 10 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01731 Vimu-Chr2 12406605 12407003 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01731 22 129 Monolignol Biosynthesis Gene Families AT5G48930 36.111 5.59e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01731 K19861 - vra:106774835 196.823