Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01729 ATGTGTGATGGACACGGTTACGAACAATTCATGAGTACGTGGGCGGAAATGGCTAGAGGTGCAACCAAACCTTCCGTCGCACCATTGTGGCGTAGGGGGCTCTTAATGGCAAGAGACCCACCTCGCATTACATACAACCATCGCGAATTCGAGCAACACTGCACCACATTTGATCTCATCACAGCATGCCTCTGGCGCTGTCGCACAAAAGCACTGCAGATAGAGGCAGGCGAGGATGTCCGAATGATGTTCGTAGTCAACGCACGTGGTCGGTTCAATCCTCCACTTCCTTTTGGTTACTACGGTAACGCTTTTGCATATCCGGCGGCAGTAACGACTGCAGGGAAGCTTTGCAGAAAGCCATTTGGGTATGCGGTGGAATTGATAAATAAAGTGAAAGGTGAGATGACAGAAGAGTACCTGCGATCTGTTGCAGACCTGATGGTGATGAAGGGACGATGCTTATTCACAACTGTGAGGTCTTGTATTGTGTCATCTTTGGCACGTTTTAACCTTAGAGAAGTTAATTTTGGTTGGGGTGAGGCTGTGTACGGTGGAGTGGCCCATGCTGGGCTGGGACAAGGAATAATATTTCCGATTTGGTTACCTGCTGAAGCTATGGAGAGGTTTGCTGAAGAGTTTAACCACGTGCTAGGCAATAAAAACCAACCTCAAAACAGTTCTGCTACTTTTACAATGTCTACCCTGTAA 711 0.4782 MCDGHGYEQFMSTWAEMARGATKPSVAPLWRRGLLMARDPPRITYNHREFEQHCTTFDLITACLWRCRTKALQIEAGEDVRMMFVVNARGRFNPPLPFGYYGNAFAYPAAVTTAGKLCRKPFGYAVELINKVKGEMTEEYLRSVADLMVMKGRCLFTTVRSCIVSSLARFNLREVNFGWGEAVYGGVAHAGLGQGIIFPIWLPAEAMERFAEEFNHVLGNKNQPQNSSATFTMSTL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01729 236 Pfam Transferase family 52 199 - -
Vimu2g01729 236 Gene3D - 36 219 IPR023213 -
Vimu2g01729 236 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01729 Vimu-Chr2 12392200 12393019 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01729 2 192 Monolignol Biosynthesis Gene Families AT5G48930 24.797 2.32e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01729 K19861 - var:108341556 395.971