Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01726 ATGGCCTCGTCATCATCTTCTTCTTCTCTCAAGTTTACAGTCAGAAGATGCCAACCGCAGCTGGTGCCTCCTGCCATGCCCACTCCTCGTGAAGTTAAGCCACTTTCCGACATTGATGATCAAGATGGTTTGCGTATCCATCTTCCCATGATACACATTTATAAAAAGCAAGCATCAATGGCAGAGAAAGATCCAGTTCAAGTCATTCGCCAAGCACTCTCGCGGACACTTGTCTTCTATTACCCATTTGCGGGTAGACTTAGGGAGGGGCCTCACCGCAAATTGACGGTGGATTGCACCGGAGAAGGTGCCATGTTCATTGAGGCTGATGCAGACGTCACACTTGATCAGCTTGGCGATTCTCTCCAGCCTCCATTCCCATGCTTCCATGAACTGTTATACGATGTCCCTGGCACACAAGAAATTACCAACACTCCCCTTCTACTTGTACAGGTGACACGGCTCAAGTGTTGTGGTTTCATCTTAGCCATCGGCCTCAACCACACCATGTGCGATGGACCCGGTTACGCACAATTCATGAGCGCGTGGGCGGAAATGGCTAGAGACCAAAACATGGTTCAACGATCATTCTTCTTTGGACCACTCGATATAGCTTCACTTCGGCGCTTGATTCCCCAACACCTTCAGCACTGCACCACATTTGATCTCATCACAGCATGCCTCTGGCGCTGTCGCACAAAAGCACTGCAGATAGAGACAGACGAGGATGTTCGCATGATGTGCATAGTCAACGGACGTGGTCGGTTTAACCCTCCACTTCCTGTTGGTTACTACGGCAACGCTTTTGCATATCCGGCGGCAGTAACGACTGCAGGGAAGCTATGCAGAAAGCCATTTGGTTATGCGGTGGAATTGATAAATAAAGTGAAAGGTGAGATGACAGAAGAGTACCTTCAATCTGTTGCAGACCTGATGGTGATGAAGGGAAGATGCTTATTCACAACTGTGAGGTCTTATATTGTGTCACATTTGGCACGTTTTAACCTTAGAGAAGTGGATTTTGGTTGGGGTGACGCTGTGTACGGTGGAGTGGCCAAAGCTGGGGTTGGGAGCTTTTTAGGAGTTTCGTATTTCTGTTCTGCTAAGAATGGAAAAGGAGAAGAAGGCATAATATTTCCGATTTGCTTACCTGCTGAAGCTATGGAGAGGTTTGCTCAAGAGTTTAACCTCATGCTAGGCAACAAAAACCAACCTCAAACCACTTCTGCTACTCTTATAATGTCTACCCTCTAA 1254 0.4753 MASSSSSSSLKFTVRRCQPQLVPPAMPTPREVKPLSDIDDQDGLRIHLPMIHIYKKQASMAEKDPVQVIRQALSRTLVFYYPFAGRLREGPHRKLTVDCTGEGAMFIEADADVTLDQLGDSLQPPFPCFHELLYDVPGTQEITNTPLLLVQVTRLKCCGFILAIGLNHTMCDGPGYAQFMSAWAEMARDQNMVQRSFFFGPLDIASLRRLIPQHLQHCTTFDLITACLWRCRTKALQIETDEDVRMMCIVNGRGRFNPPLPVGYYGNAFAYPAAVTTAGKLCRKPFGYAVELINKVKGEMTEEYLQSVADLMVMKGRCLFTTVRSYIVSHLARFNLREVDFGWGDAVYGGVAKAGVGSFLGVSYFCSAKNGKGEEGIIFPICLPAEAMERFAQEFNLMLGNKNQPQTTSATLIMSTL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01726 417 Gene3D - 197 396 IPR023213 -
Vimu2g01726 417 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 391 - -
Vimu2g01726 417 Gene3D - 28 196 IPR023213 -
Vimu2g01726 417 Pfam Transferase family 217 397 - -
Vimu2g01726 417 Pfam Transferase family 17 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01726 Vimu-Chr2 12335950 12338278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01726 45 393 Monolignol Biosynthesis Gene Families AT5G48930 26.485 8.17e-42 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01726 K19861 - pvu:PHAVU_006G098400g 634.024