Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01724 ATGGCTTCATCATCTTCCTGTCCACCGTTTACTATGCATAAATGCAAACCTGAGCTAGTGACTCCTTCAATACCCACTCCCGACGAAACTAAACTACTGTCTGAAATAGATGATCAAAACTACCTTCGTTTTCATTATTCAATAATACAAATCTATCAGAATGAATCATCAATGGCGAATAAAGACCCAGTAAGAGTGATTCGGCAGGCACTGGCACAAGCACTCGTTTTCTATTACCCATTTGCAGGTAGGCTTAGGGAGGGTCGTGGCCACAAATTAATGGTGGATTGCACCGGAGAGGGTGTCATGTTCATTGAGGCTGACGCTGACGTAACACTCGATCAGTTTGGTGACGATCTTCAACCTCCATTCATACACTCTAAGGCATTTATGTGTGATGTTGCAGAATCCGAAGATATTAAAAATTTGCCCCTTCTACTCATCCAGGTGACAAGACTCAAGTGTGGTGGTTTTGTGGTGTCGACAGGGTGGAACCACGTGATGGCAGACGGAGCTGGTCTGTCACAGTTCATGCAAGCATGGGCTGAAATGGCTCGAGGTATAAAGACTCCTTCCATTTCACCTCTATGGAGAAGGGAGCTTCTAATGGCAAGAGATCCACCTCACATTACATGCAACCATCGTGAATACGACCAAATCCAAGACGACAACCTCAATTCTCCCGACCTCGACCTGGTTCATCGATCATTCTTCTTCGGACCTGCTCAGATGGCTGCCCTTCGTGGTTTGCTTCCCCGTCAGCTTCGACAGTGCACCGCATTCGATCTCATCACGGCATGCTTCTGGCGTTGTCGCACAAGAGCGCTGCAAATAGACGCAGACGAGGATGTCCGCATGATGTGCATCGTGAACGCGCGTAACAGGTTCCGTCCTCCGTTACCTGTTGGTTACTACGGCAACGCTTTTGCATACCCTGCCGCAATGACCACCGCGGGGAAGCTCTGCGCAAATCCGTACGCGTATGCGGTGGAGTTGATTCACAACGTGAAGGGTGAGGTGACAGAGGAGTATATGCATTCGGTGGCGGATCTAATGGTGCTTAAGGGACGGTGCATGCCCACAACTGTAAGGTCATGTTTGGTGTCAGACCTGACTCGTGCTAGGTTCAGGGACGTTGATTTTGGGTGGGGCAAGGCTTTGTCTGGTGCACCAGCCAAAGGTAGCACTGGACCCTTTTACGGAGGAACTCACATCGTGTCGTATAAGAATTCGAAAGGAGTAGATGGGTTGGTGTTACCAGTTTGGATGCCCACAGAAGCCATGCCCATGTTTGTTAAAGACATGGAAGATATGATGAGTGGCAACCAAAACCAGCAGAGCCACCCTACAAAAGCTGCTTCTTTTATCAGGTCTACCATGTAG 1383 0.4873 MASSSSCPPFTMHKCKPELVTPSIPTPDETKLLSEIDDQNYLRFHYSIIQIYQNESSMANKDPVRVIRQALAQALVFYYPFAGRLREGRGHKLMVDCTGEGVMFIEADADVTLDQFGDDLQPPFIHSKAFMCDVAESEDIKNLPLLLIQVTRLKCGGFVVSTGWNHVMADGAGLSQFMQAWAEMARGIKTPSISPLWRRELLMARDPPHITCNHREYDQIQDDNLNSPDLDLVHRSFFFGPAQMAALRGLLPRQLRQCTAFDLITACFWRCRTRALQIDADEDVRMMCIVNARNRFRPPLPVGYYGNAFAYPAAMTTAGKLCANPYAYAVELIHNVKGEVTEEYMHSVADLMVLKGRCMPTTVRSCLVSDLTRARFRDVDFGWGKALSGAPAKGSTGPFYGGTHIVSYKNSKGVDGLVLPVWMPTEAMPMFVKDMEDMMSGNQNQQSHPTKAASFIRSTM 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01724 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 431 - -
Vimu2g01724 460 Pfam Transferase family 15 438 - -
Vimu2g01724 460 MobiDBLite consensus disorder prediction 440 460 - -
Vimu2g01724 460 Gene3D - 9 214 IPR023213 -
Vimu2g01724 460 Gene3D - 215 434 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01724 Vimu-Chr2 12302334 12303818 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01724 19 433 Monolignol Biosynthesis Gene Families AT5G48930 29.070 4.63e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01724 K19861 - gmx:100792864 608.216