Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01723 ATGGCCTTATCATCATCTTTTTTTCCTTCATCTTTTTCTTCTCTCAAGTTTACAGTGCGAAGGTGCCAACCCCAGCTGGTGCCTCCTGCTATCCCTACTCCTCATGAATTTAAGCCACTTTCCGACATTGATGATCAAGATGGTTTGCGTTTCCACATTCCCTTCATACATATTTATCCAAAGAGAGCATCAATGGCAGAGAAAGACCCAGTTCAAGTCATTCGCCAAGCACTCTCCCAGACACTCGTCTTCTATTACCCATTTGCGGGTAGGCTTAGGGAGGGGCCTCATCGCAAATTGATGGTGGATTGCACCGGAGAAGGTGCCATGTTCGTTGAGGCAGATGCTGACGTCACACTCCATCAGTTCGGCGATTCTCTCCAGCCTCCATTCCCATGCTTCCATGAACTGCTATATGTTCCTGCCCCACAAGAAATTAGCAACACTCCCCTTCTACTCGTACAGTTCTTTGATGTCGGAAATGAACTGATGAAATCACAGGTGACACGCCTTAGATGCGGTGGTTTCATCTTGGCTTTCTGCTTCAACCACACCATGTGTGACGGAGCTGGTCTTTCACAATTCATGAGGACATGGACTGAAATGGCTCGTCGTCCAACCAAACCTTCCATTCCACCTGTGTGGTGTAGGGAACTCCTGATGGCAAGACATCCACCTCGTATTACATGCAACCATCGCGAATACGAACATGTCCCAGACACAGTCAATGGAGCCGTCACATCAAAGCAACATGACATGGTTCTTCGATCGTTCTTCTTTGGACCTTCCCAAATAGCTACTATTCGTGGGTTGGTTCCACCCCACCTTCAGCACTGCACAACGTTTGATCTCATCACGGCATGCTTCTGGCGCTGTCGTACAAAAGCATTGCAGATAGAGGCAGACGAGGATGTTCGCATGATGGTGATAGTGAATGCACGTGCAAGGTTGAATCCTCCTTTACCAGTTGGCTACTACGGCAATGCTATTGCATACCCTGCAGCAGTTACCACGGCAGGGAAGCTTTGTGAAAATCCATTTGGGTATGCTGTGAATTTGATAAATAAAGTGAAGGGTGAGGTGACAGAGGAATACGTACATTCTGTGGCGGATCTATTGGTGTCTAAAGGACGGTGCTCTTTCACACCGGTGAGATCTTTCATTGTGTCCGATTTGAGACGTTTTAGTTTCAGAGAAATTGATTTTGGTTGGGGTAAAGCATTGTACGGTGGAATAGCCAAAGCTGGAGCTGGAGCATTTCCTGCAGTAATATATCTGATATCGCATGAGAATGCAAATGGAGAAGAAGGTGTAGTTATACCAATTTGGTTGCCTGCCAAAGCCATGGAAAGGTTTGAACACGAGTTATGTGACATGCTTCGAAACTAA 1389 0.4658 MALSSSFFPSSFSSLKFTVRRCQPQLVPPAIPTPHEFKPLSDIDDQDGLRFHIPFIHIYPKRASMAEKDPVQVIRQALSQTLVFYYPFAGRLREGPHRKLMVDCTGEGAMFVEADADVTLHQFGDSLQPPFPCFHELLYVPAPQEISNTPLLLVQFFDVGNELMKSQVTRLRCGGFILAFCFNHTMCDGAGLSQFMRTWTEMARRPTKPSIPPVWCRELLMARHPPRITCNHREYEHVPDTVNGAVTSKQHDMVLRSFFFGPSQIATIRGLVPPHLQHCTTFDLITACFWRCRTKALQIEADEDVRMMVIVNARARLNPPLPVGYYGNAIAYPAAVTTAGKLCENPFGYAVNLINKVKGEVTEEYVHSVADLLVSKGRCSFTPVRSFIVSDLRRFSFREIDFGWGKALYGGIAKAGAGAFPAVIYLISHENANGEEGVVIPIWLPAKAMERFEHELCDMLRN 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01723 462 Gene3D - 13 236 IPR023213 -
Vimu2g01723 462 Pfam Transferase family 22 456 - -
Vimu2g01723 462 Gene3D - 237 456 IPR023213 -
Vimu2g01723 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01723 Vimu-Chr2 12299713 12301152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01723 50 459 Monolignol Biosynthesis Gene Families AT5G48930 27.465 5.69e-44 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01723 K19861 - gmx:100792864 660.988