Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01597 ATGCCCAAAGTTTTCACCTCCCAACGCCATTGGTATTCATCCACCGTTACTTCTCTGGATTCCGCCGCTCAAAACGTTAACCGTAGCATTTTGTACTCTTATGAAAACGCACTTCACGGTTTCAGTGTTGCCTTATCACCAAAGCAGTTAGAGAGTCTCAAAGAAACACCAGGTTTCATCTCAGCATACAGCGACAGAGCAGCCACTCTTGACACCACCGCTTCCTACGCCTTCCTCTCTCTCAACGTCTCTCACGGCCTCTGGCCAGCTTCCAACTACGGCCAAAACGTCGTCGTTGGCGTCGTCGATTCCGGAATCTGGCCCGAGAGCGACAGGAAGGGAAAGTGCGAGGGTGGTCAACGCTTTGACCCCTCCCTCTGTAACTCCAAACTCATAGGCGCAAGGTACTTCAACAAAGGCCTTCTCGCAGCGCAGGACGGTGATGACGACACTAAAATTGGCTCCAACTCCGTTAGAGATAGCGTTGGACACGGGACCCACACCGCGTCCACGGTGGCCGGAAACTACGTGAGAGGCGCGTCGGTTGCGTGGGACCAAGGCGTGTTTGCCTCGGACATGCTCGCAGGTTTGGACCAGGCAATCGCTGACGGAGTGGACGTTATTTCCATTTCAATGGGTTTGGATATGGTGCCCTTGTACGAGGATCCCGTCGCAATCGCCGCTTTCTCTGCTTTGGAAAAAGGCGTGGTGGTTTCAGCTTCTGCAGGAAACGCAGGTCCGTCACTGGGATCCATACATAATGGGATTCCGTGGGTTTTAACGGTGGGAGCGAGCAACACAGAACGCTCTTTTGGCGGCACGTTAATTCTAGGAAACGGGAAGAGGTTTTCCGGGTGGACTCTGTTCCCAGCAAGTGCCACGGTCAATAACCTTCCTCTGGTTTACCATAACAACGCTTCCGCATGTGACTCTTCTACACTGTTGTCACAAGTGGCGCGTGGCAGCGTCGTCATATGCGATTCTGTTATGGATGTTAACCAGCAGATTCAGCAAGTGTCACTCTCTGCAGTGTATGGAGCTGTGTTTATATCCAGTGATTCCACTCTCTTTGAAACGGGAAAAATGACGTTTCCGGGCCTTGTTATTAGCCCTCACCAAGGTAAGAATGTGATCAAATACGCACGCGCCACTCGACCCGCTTCCGCCACCTTAAAGTTTCAAGAAACGTTCGTGGGAACCAAACGGGCTCCCACGGTGGCCAGTTACAGTTCCAGAGGCCCGTCTTGGGAGTGTCCGTGGGTATTGAAGCCCGACGTTATGGCTCCGGGGTCCTCGATTTTGGCGGCTTGGGTTCCGGATTTGCCTGCGGCCCAAATTGGCCCAAACGTGGTGTTAAATAATGAATACAATTTGATGTCTGGGACGTCGATGGCTTGTCCTCATGCTTCCGGGGTGGTGGCTCTGTTACGGAATGCACACCCCGAGTGGAGTGCTTCGGCTGTTAGGTCCGCGTTGATAACTACGGCCAGCCCACTGGATAACTCTGGAAAGCCCATCGAAGAAAATGGAGAGCTCTCTCCACGGGCTTCACCTCTCGCCATGGGCGCTGGCCTGATTGACCCCAACCGTGCTCTTGACCCAGGTCTGGTTTATGACGCCACCCCTCAAGACTATGTTAACCTCCTCTGTGCAATGAATTTCACCCAGGCCCAAATCTTGACCATTACCAGATCAAAGGCCTACAATTGCTCAAGCCCATCTTACGACGTCAATTATCCCTCTTTCGTGGCATTTTCTGTTGACCCGAGTGTGACAGTGGAGAGAAAATTCCGGAGAAGTGTGACCTACGTTGGAGATGGTCCAGCCGCTTACACGGCACGTGTGAGCTCGTCTAATAGCACGCAAATCTCAGTTTCTCCCAATAGGTTGGTCTTCAAGGCAAAATATGAGAAACGGAAATTCAGTTTGACGTTGAAGTCTGAAATGAAGAAGGAAAATGCAATTGCTTTTGGTTCATTGGAATGGGTGGAAGAAACAGGAAGGCACGTTGTTCGGAGTCCCCTTGTGGTTGTACCCACCAACTTTGTACCCAATGGGATTTAA 2064 0.5174 MPKVFTSQRHWYSSTVTSLDSAAQNVNRSILYSYENALHGFSVALSPKQLESLKETPGFISAYSDRAATLDTTASYAFLSLNVSHGLWPASNYGQNVVVGVVDSGIWPESDRKGKCEGGQRFDPSLCNSKLIGARYFNKGLLAAQDGDDDTKIGSNSVRDSVGHGTHTASTVAGNYVRGASVAWDQGVFASDMLAGLDQAIADGVDVISISMGLDMVPLYEDPVAIAAFSALEKGVVVSASAGNAGPSLGSIHNGIPWVLTVGASNTERSFGGTLILGNGKRFSGWTLFPASATVNNLPLVYHNNASACDSSTLLSQVARGSVVICDSVMDVNQQIQQVSLSAVYGAVFISSDSTLFETGKMTFPGLVISPHQGKNVIKYARATRPASATLKFQETFVGTKRAPTVASYSSRGPSWECPWVLKPDVMAPGSSILAAWVPDLPAAQIGPNVVLNNEYNLMSGTSMACPHASGVVALLRNAHPEWSASAVRSALITTASPLDNSGKPIEENGELSPRASPLAMGAGLIDPNRALDPGLVYDATPQDYVNLLCAMNFTQAQILTITRSKAYNCSSPSYDVNYPSFVAFSVDPSVTVERKFRRSVTYVGDGPAAYTARVSSSNSTQISVSPNRLVFKAKYEKRKFSLTLKSEMKKENAIAFGSLEWVEETGRHVVRSPLVVVPTNFVPNGI 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01597 687 Gene3D Peptidase S8/S53 domain 184 545 IPR036852 GO:0004252|GO:0006508
Vimu2g01597 687 Pfam Peptidase inhibitor I9 4 67 IPR010259 -
Vimu2g01597 687 Pfam Fibronectin type-III domain 576 677 IPR041469 -
Vimu2g01597 687 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 71 IPR037045 -
Vimu2g01597 687 CDD PA_subtilisin_like 274 391 - -
Vimu2g01597 687 Gene3D - 268 398 - -
Vimu2g01597 687 ProSiteProfiles Serine proteases, subtilase domain profile. 75 532 - -
Vimu2g01597 687 SUPERFAMILY Subtilisin-like 80 536 IPR036852 GO:0004252|GO:0006508
Vimu2g01597 687 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 677 IPR045051 -
Vimu2g01597 687 Pfam Subtilase family 94 500 IPR000209 GO:0006508|GO:0008236
Vimu2g01597 687 ProSitePatterns Serine proteases, subtilase family, serine active site. 461 471 IPR023828 -
Vimu2g01597 687 PRINTS Subtilisin serine protease family (S8) signature 460 476 IPR015500 -
Vimu2g01597 687 PRINTS Subtilisin serine protease family (S8) signature 94 113 IPR015500 -
Vimu2g01597 687 PRINTS Subtilisin serine protease family (S8) signature 160 173 IPR015500 -
Vimu2g01597 687 Gene3D Peptidase S8/S53 domain 96 182 IPR036852 GO:0004252|GO:0006508
Vimu2g01597 687 Gene3D - 549 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01597 Vimu-Chr2 11229802 11231973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01597 2 665 Subtilisin-like Serine Gene Family AT5G67090 38.268 7.66e-158 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01597 - - ccaj:109796640 1062.37