Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01512 ATGGCTTCAAATCCCAAAACCTTGACTTTTGAGGAGGTGTCTAAGCACAACCACAAAAAGGATTGCTGGATCATTGTCAATGAAAAGGTGTATGATATCACCCCATTTTTGGATGACCATCCAGGAGGTGATGAAGTTTTGGTGACGTCAACAGCGAAGGACGCCACCATTGATTTTGAAGATGTGGGCCACAGTGATTCTGCCGTAGAAATCATGGAAAAATACTATATTGGGAACTTTGACACTTCCACTCTTCCGGCTAAAGTGAACCATAGACAGCCACCACCTACACAAGCTCACGGCGGTGGCAATCAATCTTCTGAATTTGTTGTAAAGATCTTGCAGTTCCTGTTGCCTTTGCTGATATTGGGCGCTGTCTTTGCTCTGCAGTCGTATGGCAAAGAGAAGCAGGCAGCACCACATGAAAGCTGA 432 0.4514 MASNPKTLTFEEVSKHNHKKDCWIIVNEKVYDITPFLDDHPGGDEVLVTSTAKDATIDFEDVGHSDSAVEIMEKYYIGNFDTSTLPAKVNHRQPPPTQAHGGGNQSSEFVVKILQFLLPLLILGAVFALQSYGKEKQAAPHES 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01512 143 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 79 IPR001199 -
Vimu2g01512 143 Gene3D - 1 85 IPR036400 -
Vimu2g01512 143 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Vimu2g01512 143 FunFam Cytochrome b5 type B 2 85 - -
Vimu2g01512 143 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 91 IPR036400 -
Vimu2g01512 143 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Vimu2g01512 143 PANTHER CYTOCHROME B5 4 134 - -
Vimu2g01512 143 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Vimu2g01512 143 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Vimu2g01512 143 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Vimu2g01512 143 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Vimu2g01512 143 SMART Cyt_b5_2 8 81 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01512 Vimu-Chr2 10470240 10472487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01512 1 135 NADPH P450 reductases AT5G53560 56.296 4.98e-55 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01512 K23490 - gmx:100788796 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01512 2 10470240 10472487 Vimu9g00053 9 672342 675711 PCT