Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01499 ATGGAGAGCCAACAGGAAGTGATGGTAGTAGGAAAGGTATGTGAAATCTATGAGGAAATCTCCAAACTAGGAGACCTCAACCCCTCCAGCCATGTCAACAACCTCTTCACCCAACTTGTCACCATTTGCACCACCCCATGTCATATAGATGTTTCTCAGCTGAGCCAACAGGTTAGAGAAATCATAGCAAAGCTCATTAGACTTTGTGGGAAAGCTGAGGGGCTTCTTGAGAGTCACTACTCAACCATCATAGGATCACATGAAAACCCTTTAAACCACATGAAACTCTTCCCCTACTACTCTAATTACCTCAAACTAAGTCACTTGGAGTTCACCATGCTCACCACACACTGCACCCAACAAGTCCCCTCCCAACTTGCCTTTGTGGGCTCAGGTTCCCTTCCTCTCACTTCAATCATTTTGGCCACCCATTACCTCAGGCAGACATGCTTCCACAACTACGACATGGATCCTTTGGCAAATGCCAAGGCTCATGGCTTGGTCTCTTCGGACCCTGACTTGTCCAAGAGAATGTTCTTCCACACTAATGACATTCTAAACGTGTCAAATGGCCTCAAGGACTATAACGTGGTCTACTTGGCAGCACTTGTCGGCATGGACCATAAGGAGAAAGCAGAAGTCATCAAGCACCTTGCCAAGTTCATGGCCCCAGGAGCTATTTTGTTGTTGAGGAGTGCACATGGTGCTAAAGCCTTCCTCTACCCGGTGGTTGATCCTTCTTCTGATCTCAAAGGTTTTGAAGTTCTCTCGGTTTTTCACCCCACTGATGAGGTTATTAACTCAGTTATTGTTGCACGCAAGCATTTGGTGAATCAAGGGACTTATTCGGTAGTGTTGGCTAGCAAATGCTATGGAGTTGAAGGGTTTAATCCCTTCAACCATGGAAAGGTTATTGAGGAGTTGACTGTTGAGGATCAAGCTTGA 945 0.4603 MESQQEVMVVGKVCEIYEEISKLGDLNPSSHVNNLFTQLVTICTTPCHIDVSQLSQQVREIIAKLIRLCGKAEGLLESHYSTIIGSHENPLNHMKLFPYYSNYLKLSHLEFTMLTTHCTQQVPSQLAFVGSGSLPLTSIILATHYLRQTCFHNYDMDPLANAKAHGLVSSDPDLSKRMFFHTNDILNVSNGLKDYNVVYLAALVGMDHKEKAEVIKHLAKFMAPGAILLLRSAHGAKAFLYPVVDPSSDLKGFEVLSVFHPTDEVINSVIVARKHLVNQGTYSVVLASKCYGVEGFNPFNHGKVIEELTVEDQA 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01499 314 Gene3D Vaccinia Virus protein VP39 7 275 IPR029063 -
Vimu2g01499 314 PANTHER NICOTIANAMINE SYNTHASE 3 3 291 IPR004298 GO:0030410|GO:0030418
Vimu2g01499 314 Coils Coil 311 314 - -
Vimu2g01499 314 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 279 IPR004298 GO:0030410|GO:0030418
Vimu2g01499 314 Pfam Nicotianamine synthase protein 6 277 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01499 Vimu-Chr2 10359697 10361052 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01499 5 274 Nicotianamine Synthase Gene Family AT1G56430 57.721 6.11e-114 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01499 K05953 - gmx:100814069 533.487